Sus scrofa (pig): 100737779
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Entry
100737779 CDS
T01009
Symbol
GABPA
Name
(RefSeq) GA-binding protein alpha chain isoform X1
KO
K09441
GA-binding protein transcription factor, alpha
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100737779 (GABPA)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
100737779 (GABPA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
100737779
NCBI-ProteinID:
XP_020927099
UniProt:
A0A8D0T790
A0A4X1UEZ4
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All DBs
Position
13:189289513..189327501
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AA seq
454 aa
AA seq
DB search
MTKREAEELIEIEIDGTEKPECTEESIVEQTYTPAECISQAIDINEPIGNLKKLLEPRLQ
CSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPAETV
EVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERL
GIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEIL
WSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTAIKAISSSAKAAKVQRAP
RISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKW
GQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTE
CEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaagagaagcagaggagctgatagaaattgagatcgatggaacagagaaacca
gagtgcacagaagaaagcattgtagaacaaacctataccccagctgaatgcataagccaa
gccatagacatcaatgaaccaataggcaatttgaagaaactactagaaccaagactacag
tgttctttggatgctcatgaaatttgcctgcaagatattcagctggatccagaacgaagt
ttatttgaccaaggagtaaagacagatggaactgtacagcttagtgtacaggtaatttct
taccaaggaatcgaaccaaagctaaacatcctggaaattgttaaaccggcagaaacagtt
gaagtagttattgatccagatgcccaccatgctgaagcagaagcacatcttgttgaggaa
gctcaagtgataactcttgatggcacaaaacacattacaactatttcagatgaaacctca
gaacaagtgacacgatgggctgctgcacttgagggttataggaaagagcaagaacgtctt
gggataccctatgatcccatacagtggtccacagaccaggtcctgcactgggtggtttgg
gtaatgaaggaattcagcatgaccgacatagacctcactacactgaatatttccggaaga
gaactgtgtagtctcaaccaagaagacttttttcagcgggttcctcggggagagattctc
tggagtcatctggaacttcttcgaaaatatgtattggccagccaagaacaacagatgaat
gagatagttacaattgatcaacctgtgcagattattccagcatcagttcagtctgctaca
ccaactgcgattaaagctataagtagtagtgcaaaggcagctaaagtacaaagagctcca
aggatttcaggagaagatagaagttcacctggaaacagaacaggaaacaatggtcaaatc
caactgtggcagtttttgctagaacttcttactgacaaggatgctcgagattgcatttct
tgggttggtgatgaaggagagtttaagctaaatcagcctgaactggttgcacagaaatgg
ggacaacgtaaaaataaacccaccatgaactatgagaaacttagtcgtgcattaaggtat
tattatgatggggacatgatttgtaaagttcaaggcaagagatttgtatacaagtttgtc
tgtgacttgaagactcttattggatacagtgcagcagagttgaaccgtttggtcacagaa
tgtgaacagaagaaacttgcaaagatgcagctccatggaattgcccagccagtcacagca
gtagcccttgctactgcatctctgcaaacagaaaaagataattga
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