KEGG   Sus scrofa (pig): 100737957
Entry
100737957         CDS       T01009                                 
Symbol
NWD1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ssc04990]
    100737957 (NWD1)
Domain-containing proteins not elsewhere classified [BR:ssc04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   100737957 (NWD1)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_NWD2_C ANAPC4_WD40 NBCH_WD40 NACHT Beta-prop_RIG_2nd Beta-prop_WDR75_1st AAA_16 Beta-prop_LRRK2 Beta-prop_SCAP Beta-prop_DCAF4 NPHP3_N WDR90_beta-prop_4th Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_Vps41 Beta-prop_IFT122_2nd ATPase_2 AAA AAA_22 DUF4062 Beta-prop_ELP1_1st AAA_5 Beta-prop_Nup120_160 DUF5570 Beta-prop_EIPR1 Mg_chelatase Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 100737957
NCBI-ProteinID: XP_020939236
UniProt: A0A8D0X0V5 F1S9U8
LinkDB
Position
2:complement(60800064..60906536)
AA seq 1565 aa
MDAEREALQSTAYPEVQTFCQKHGLMFEVVDLRWGIQNTEATDHMTTELCLEELDRCRKT
SIGPAFVALLGDQYGPCPIPTLIEEKEWEALKAQLTASPRDLELVARRFWRDENAVPPTY
LLQAPCTGEARGPEEATLTSVLRTGAQEARRLGLITQEQWHRYHRSVIEWEIERGLLSST
DGDRGVTVFLREIQDLNKHILEDCALKMVDRLMDGCLDTDAQNLLSSLKGRIANKQPGVL
KAHHLTWSRDLVNPKNKAHARYLKELGEQFVARANYQVLEHLRELEVGRQELAWLYQEIR
HHLGLSAEATRTFCGRQELLAQLGQQLRLSDSQPHPPLVLFGPPGIGKTALMCKLAERMP
GLLGRKTVTVLRLLGTSQMSSNARGLLHSICFQVCLAYGLPLPPAQVLEAHARVVQFFHA
LLHTVSCRNFESLVILLDSVDEVDSVHRARRIPWLPPNCPPRVHLILSACSGQQGVLDTM
QKVLTDPGAYWEVKPLSGNQGQEMIQLLLAASRRTLSPMQRDLLWASLPECGHPGRLRLA
FEEARKWASFTVPAPLASTSREATHQLCVRLEQTHGQLLVARVLGYIVSSRHGLSEAELK
DVLSLDDEVLQAVYQDWTPPSRELLRFPPLLWVRLRRDLGICLARRPVDGFLLLAIAHRQ
LAEVVQERYLSVPEKAKSHGVLADFFSGAWSQGTKKLITLPLVGKPLNLDRKVAPQPLWF
SDAVANLRKLKELPYHLLHSGRIEELKQEVLGNMNWISCRGISGGIEGLLDDFDLCAPHV
DCSEVSLVREALQLCRPAVELRGMERSVLYTELLARLHFFATSHPALVGQLCQQAQSWFR
VSPFPVLVPLGGFLQPPGGPLRATLTGCHKGITAMAWSLEEKLLVVGTQEGMVAVWDMEE
QQVIHILTGHRGEVRCVKVFAKGTLAISASKDHTLRLWNLLSGQEKITIWDGGSKDSTEP
QIWSLHVDESKKAVYSASSSKVNAWNLETGELIFCILGDASEPWVSTAVLTSQATLLTAS
KGCVVCLWSSDTGKLLRKQHLSSIKEETLTCVVSVQKQGKMLTGTSKGSISLFSSEGDSL
LEKLPEAVGFLVVSEDESLLAAGFGRSVRIFLADSQGFHRFMATDLEHEDMVETAVFGPE
NNLIVTGSRDALIQVWSLSEQGTLLDILEGVGAPVSLLAQAGTLVASASHQSSSFKVWDL
GYTQKPRASTPFLDRTGLTAVSHNGSYIYFPKVGDKNKVTIWDLAEGEEQDTLDTSNEVK
CLEVAEQTKLLFTGLVSGIVLVFPLNSRQDVMCIPPPEARKAINCMALSKDEGRLAIAYD
SIVLVLDISPGDPCPVINGPTYTFYTQLPDTIASVAVLADYRVVYGMTNGDLFLYECANS
KVFPLEAHRSRVTCVEVSHKEQLAVSGSEEALLCLWDLQTCKWKFEMSSTNSYCRGVQCA
CFSKDDNYVYAGLKDRSIIVWSVLDGTLLAVQFVHAIVNRIIPTANGFIAPTRHGYLIRE
RFQCPSSRVSQQDPLKNFKKAVWMVKSRQREELAAAAGALQDSRSGSAQGNESKSNKRSQ
VCLLV
NT seq 4698 nt   +upstreamnt  +downstreamnt
atggacgcagagagggaggccctgcagagcaccgcctacccagaagtgcagaccttctgc
cagaagcatggcctgatgttcgaggtggttgatctgaggtggggtatccagaacaccgag
gccactgaccacatgaccacagaactctgcttggaggagcttgaccggtgtcggaaaaca
tccatagggccagcttttgtcgccctcctaggtgaccagtacggcccctgtcccatcccc
acgctgattgaggaaaaggagtgggaggcgctgaaggctcagctgaccgcgagtccacgt
gatctggagctggtggcacgacgcttctggagggacgagaacgctgtgccccccacctac
ctgctgcaggccccatgcactggggaggcccgtggccccgaggaggccaccctgacctct
gtcctgcgcacaggagcccaggaggcccggaggctgggcctcatcacccaggaacagtgg
caccgctaccaccgatcagtcattgaatgggaaatagaacggggcctgctgagctcaaca
gatggggaccggggggtgactgtcttcctgagagagatccaggacctcaacaaacacatc
ttggaagactgtgccctcaagatggtagaccggctcatggacggctgcctggacacagat
gcccagaacctcctcagcagcctcaaggggcgcatcgccaacaagcagcctggagttctc
aaggcccaccacctgacatggagtcgagatctggtgaaccccaaaaacaaggctcacgcc
cggtacctgaaggagctgggggagcagtttgtggccagggctaactatcaggtcctcgag
cacctccgagagctggaggtgggcaggcaggagttggcatggctctaccaggagatccgc
caccacctagggctcagtgctgaggccaccaggaccttctgtgggcgccaggagctactg
gcccagctggggcagcagctcaggcttagtgacagccagcctcacccgcctctggtgctc
tttggacccccaggcattggaaagactgctctgatgtgcaagcttgctgagcgaatgcca
gggctgctgggccgcaagacagtgactgttctgcgccttctagggacctcacagatgagc
tccaatgcccgaggcctgctccacagcatctgcttccaggtgtgcctggcctacggactg
ccactgccccctgcccaggtcctggaggcccatgccagggtggtccagtttttccatgcc
ctcctccatactgtctcctgcagaaactttgagtctctcgtgatcctcctggattcggtg
gatgaggtggactctgtccaccgtgctcggaggattccctggctgcctcccaattgccct
cccagggtccacctcatcctctcagcctgctcaggacagcagggggttttagacaccatg
cagaaggtgctcacagacccaggggcttactgggaggtgaaacctctctccggaaaccag
ggacaagagatgatccagctcctgctggcagcctcaaggaggacgctgagccccatgcag
agggacctgctctgggccagccttccagagtgtggacacccagggcggctgaggctggcc
tttgaggaggccaggaaatgggcctccttcactgtgccggcccctctggcctccacttct
agggaagcaacgcaccagctgtgtgtccgtctggagcagacacacgggcagctcctggtg
gcccgtgtgttgggctacattgtatcttcccggcatgggctctcggaggcagagctgaag
gatgtcctgtccttggatgatgaagttctgcaagctgtgtaccaggactggaccccgccc
agcagggagctgctgcgtttcccacccctgctgtgggtgaggcttcgtcgagatctgggt
atctgcttggccaggcggccagtggatggcttcttgctcctggccatcgctcacagacag
ctggccgaggtggtccaagagcgctacctgtctgtgcccgagaaagccaagagtcacgga
gtcttggctgacttcttctcaggggcctggagccagggcaccaagaagctcatcaccctg
ccactcgtgggaaaacccctgaacctggaccgcaaggtggcccctcagcctctgtggttc
tcagatgcagttgcgaacctgcggaagctgaaggaattaccctatcacctgctccactcg
ggccgcattgaggagctgaagcaggaggtgctgggtaatatgaactggatttcctgccgg
ggcatctcagggggcatcgagggcctgttggatgactttgacctgtgtgcccctcacgtg
gactgttctgaggtcagcctggtccgggaagccctccagctgtgccgcccagccgtggag
ctccgaggcatggagagaagtgtcctgtatacagaacttctggccagactccatttcttc
gctacctcgcatccagcactggtgggacagctgtgccaacaggcgcagagctggttccgg
gtgagcccattccctgtgctggtgcccctcggagggttcctccagcctccaggaggaccc
ctccgggcgaccctcactggctgtcataaaggcattacagccatggcatggagcctggaa
gagaagctgctggtggttggcacccaggagggcatggtggctgtgtgggacatggaagag
cagcaggtgatccacatcctaactggacacagaggagaggtgaggtgtgtgaaagtattt
gccaaagggacgctcgccatctctgcctcaaaggaccacaccctgcgcttgtggaactta
ctctctggacaagagaaaatcaccatttgggatggaggctcaaaagattccactgaacct
cagatctggagtcttcatgtggatgaatcaaagaaggctgtatattcagcatctagctca
aaggtcaatgcttggaatctggaaactggagagctgattttctgtatcctgggtgacgcc
tccgaaccctgggtgtccacggcagtgctgacttcccaggccaccctgctgacagcatcc
aagggttgtgtggtctgtctgtggagctcagacacaggaaaactactgaggaagcaacat
ttatccagcatcaaagaagaaacacttacctgtgtggtctcggtccaaaaacaaggaaag
atgttgactgggacgagcaagggctccatctctttgttttcgtcagaaggagacagtctg
ctggagaagcttccggaagctgtggggttcctggtggtctctgaagatgagtcccttctt
gctgcaggttttggaagatccgtgcggatatttttggcagactcacaggggtttcatcga
ttcatggccactgaccttgaacatgaagacatggtggagaccgctgtttttggtcctgaa
aacaatctgattgtcactggatcccgggatgcactcattcaggtgtggagtctgtcagaa
cagggaactctgctggacatcttagaaggtgttggggcccctgtaagcctgctggcccag
gctggcaccttggtggcttctgcttcccatcagtcctcatcttttaaagtctgggatctc
ggctacactcagaagccaagggcctctaccccgtttctggaccgcactggcctcactgct
gtgtcacacaacggaagctacatttacttccctaaagttggggacaaaaacaaagtcacc
atttgggacttggcagaaggcgaggaacaggataccctggatacctccaatgaggtcaag
tgcctggaggtcgccgagcagaccaagctccttttcactggcctcgtttccgggattgtc
ctggtgttccccctgaattccagacaggatgtgatgtgcatcccccctccagaggcccgg
aaagccatcaactgcatggcgcttagtaaggacgaggggcgcctggccatcgcttatgac
agcatcgtcctggtgctggacatcagccccggggatccctgcccagtcatcaatgggcca
acatacaccttctatacccagctgcctgacaccatagccagcgtggctgttctggcggat
tatcgcgtggtctatggcatgaccaatggtgacctcttcctctatgagtgtgcgaattcc
aaggtgttccctctggaggcccacaggagtcgagtcacctgtgtggaggtcagccacaaa
gagcagctggcagtcagcgggtcagaggaagccctgctgtgtctctgggacctgcagact
tgcaagtggaaattcgagatgagctccacgaattcttactgtagaggagtccagtgcgct
tgcttctccaaggatgacaactatgtctacgcaggcttgaaggatcgctccataatcgtt
tggagtgtactggatggcaccctcctggctgtccagtttgtccatgccatagtgaataga
atcatcccaactgccaatggcttcatcgcccccaccagacatggctatctcatccgtgaa
cgtttccagtgcccttcatcaagagtctcacagcaggaccctctcaagaacttcaagaag
gcagtgtggatggtcaaatccaggcagagagaagaactggcggctgctgcaggagcactc
caggactcaagatcagggagtgcccagggaaatgaatccaagtcaaataaacgttcacaa
gtctgcttgctagtttaa

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