Sus scrofa (pig): 100738040
Help
Entry
100738040 CDS
T01009
Symbol
AQR
Name
(RefSeq) intron-binding protein aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100738040 (AQR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100738040 (AQR)
Spliceosome [BR:
ssc03041
]
Complex B
Other components
Prp19-related factors
100738040 (AQR)
Complex C
100738040 (AQR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
UvrD-helicase
DEAD
SLFN-g3_helicase
Parvo_NS1
UvrD_C_2
AAA_16
AAA
DnaB_C
PhoH
DUF4088
NB-ARC
AAA_22
ATPase
DYAD_CC
Motif
Other DBs
NCBI-GeneID:
100738040
NCBI-ProteinID:
XP_020953930
Ensembl:
ENSSSCG00000004802
ENSSSCG00000022186
UniProt:
A0A8D1QXQ3
A0A4X1UIY4
LinkDB
All DBs
Position
1:136135854..136235538
Genome browser
AA seq
1492 aa
AA seq
DB search
MTAPAQPKKIVAPTVSQINAEFVTQLACKYWAPHIKKKSPFDIKVIEDIYEKEIVKSRFA
IRKIMLLEFSQYLENYLWMNYSPEVSSKAYLMSICCMVNEKFRENVPAWETFKKKPDHFP
FFFKCILKAALAETDGEFSLHEQTVLLLFLDHCFNSLEVDLIRSQVQQLISLPMWMGLQP
ARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERKFLSQLIQKFISVLKSVPLSD
PVTMDKVHYCERFIELMIDLEALLPTRRWFNTILDDSHLLVHCYLSNLVHREEDGHLFSQ
LLDMLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVD
TRESLVKFFGPLSSNTLHQVASYLCLLPTLPKAEDTTFDKEFLLELLVSRHERRISQIQQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVVEVAKPNIGENWPTRVRADVT
INLNVRDHIKDEWEGLRKHDVCFLITVRPTKPYGTKFDRRRPFIEQVGLVYVRGCEIQGM
LDDKGRVIEDGPEPRPNLRGESRTFRVFLDPNQYQQDMTNTIQNGAEDVYETFNIIMRRK
PKENNFKAVLETIRNLMNTDCVVPDWLHDIILGYGDPSSAHYSKMPNQIATLDFNDTFLS
IEHLKASFPGHNVKVTVDDPALQIPPFRITFPVRSGKGKKRKDADGEDEDTEEAKTLIVE
PHVIPNRGPYPYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNI
YHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNY
VLARRIELLEEVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGNTLPN
VTEVSTFFPFHEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSG
LDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQN
PQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRAR
ASLCNLYNWRYKNLGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGESEPNPYFYQN
LGEAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTV
DRFQGQQNDYILLSLVRTRAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCFELTPAF
SQLTARPLHLHIIPTEPFPTSRKNGERPSHEVQIIKNMPQMANFVYNMYMHLIQTTHHYH
QTLLQLPPAMVEEGEEVQSQDTELETEEEAMPAPADIMPTLMDASSSQEASASQTEPTSN
ETETTSSQTGADSNPEATPAESKITATAAGPVATPAENNTPPDATSAPGETK
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctgcccagcccaagaaaatcgtggcccccacggtttcccagataaacgcg
gagttcgtgacgcagttagcttgtaaatactgggctccgcatatcaagaaaaaatcacct
tttgatataaaggtgattgaagatatatatgagaaagagattgtcaaatcaaggtttgcc
atcagaaagataatgctcttggaatttagccagtatcttgaaaattacctgtggatgaat
tattctccagaagtgtccagcaaagcttatttaatgtcaatctgctgtatggtgaatgag
aagttcagagaaaatgtccctgcatgggagacttttaagaagaagccagatcacttccca
ttcttcttcaagtgtatcttgaaagcggcattagctgaaaccgatggtgaattttcactc
catgaacagacagtcttactgctctttcttgatcattgcttcaatagtttggaagtagac
ttgatacggagtcaagtacagcagcttatctcgctcccaatgtggatgggcttacagcct
gcacgtttggagttagaattaaaaaagacacctaaactaagaaaattctggaacttgatt
aaaaagaatgatgaaaagatggatccagaagcaagagaacaagcctatcaagaaagaaaa
tttctttcacaactaatccagaagtttatctctgtgctgaaatcagtcccactttctgat
cctgtcactatggacaaagttcattactgtgaaagattcattgaacttatgattgatcta
gaggccctactccctacaagacgctggtttaataccatcctggatgactcccaccttttg
gttcactgttacctttccaatcttgttcacagagaagaggatggccaccttttttcccag
cttttggacatgcttaagttctatactggttttgagattaatgaccagactggaaatgct
ctgacagagaatgagatgactacaattcactatgatagaattacttctctacagagagct
gcttttgcgcatttccctgaactctatgatttcgccctctcaaatgtggcagaagtagat
acccgggaatcgttggtcaaattttttggacctcttagttcaaatacactgcaccaggtg
gcatcatacctctgcttgttaccaacgcttcctaaagctgaagacacaacttttgataaa
gaatttcttctagaattgttggtatctcgtcatgaacgtcgaatttcccagattcagcag
ttgaaccagatgcctttgtatccaactgagaaaatcatatgggatgagaatattgttccg
actgagtattattctggggaaggttgtcttgctcttcccaaattgaatttgcagtttttg
actcttcatgattacctcctaaggaactttaatctcttccgcttagaatcaacttacgaa
attaggcaagacatcgaggatagtgtcagcagaatgaagccatggcagtctgaatatggt
ggtgtagtatttggtggttgggcacgaatggcccagcccattgtggcttttactgtggtt
gaggttgcaaaacccaacataggtgaaaactggccaacccgagttcgtgcagatgttacc
atcaacctgaatgtcagagatcacatcaaagatgaatgggaaggactccggaagcatgat
gtatgctttttaattactgtgcgccccacaaaaccttatggtaccaagtttgaccggagg
agaccttttattgagcaggttggcctggtttatgtcagaggctgtgaaatccagggcatg
ctggatgataaagggcgtgtcattgaagacggacctgagcccagacccaatcttagagga
gaatcaaggacatttagagtgtttttggatccaaaccagtatcaacaagatatgaccaat
actatacaaaatggagcagaagatgtgtatgaaactttcaatataataatgaggaggaaa
ccaaaggaaaataactttaaggcggtgctagagactattcggaacctgatgaataccgat
tgtgtggtacctgactggctgcatgacatcattttaggctatggggatccaagcagtgca
cattattccaaaatgcccaatcagatcgccacccttgatttcaatgatacatttctctcc
attgagcatttaaaagccagctttcctggtcataatgttaaagtaactgtggatgaccca
gctctgcagataccccctttcaggataacttttccagtaagaagtggaaaagggaagaaa
aggaaagatgcagatggggaagatgaagacactgaagaagcaaaaaccttaattgttgaa
cctcatgttattcctaatagaggtccttatccttacaaccaacccaaacgtaatacaatt
cagttcactcatacacagatagaggccatccgtgctggaatgcagcctgggctgactatg
gttgtgggaccaccaggtacaggaaaaacagatgtggcagtccaaatcatatccaatatc
tatcacaatttcccagagcagaggactctgattgttactcattccaatcaggccctgaac
cagttgtttgagaaaatcatggctttagacattgatgagcgccacctcctgcgtcttggt
catggagaagaagagctggagacagagaaagatttcagtagatatggaagagttaattat
gtcctagctcgaagaatagaacttttagaagaagtcaaaagattacagaagagtctgggg
gttccaggagatgcttcatatacttgtgaaactgcaggctatttcttcttatatcaggta
atgtctcgttgggaagagtatataagcaaagtgaaaaataaaggtaacacattgccaaat
gttaccgaagtttccactttcttcccttttcatgagtactttgcaaatgcccctcaaccc
atttttaaaggccgatcttatgaggaagacatggaaattgctgaaggatgtttcaggcat
atcaagaaaatctttactcagctcgaggaattcagagcctctgaactacttcgaagtggg
cttgacagatctaaataccttttggtgaaagaagccaaaatcattgctatgacctgtact
catgcagccctaaaacgacatgatttagtaaagttaggtttcaagtatgacaacatttta
atggaagaggctgctcaaatcctagagatagaaacttttatacctcttcttctacagaac
cctcaggatggttttagccgactaaaacgatggattatgattggtgatcatcaccagtta
cctccagtcattaagaacatggcctttcagaagtattcaaacatggaacaatctctgttc
actcgctttgtccgtgttggagttcccactgtggaccttgatgcccaggggagggccaga
gcaagcttatgcaacctctacaactggcgatacaagaatctaggaaacttaccccatgtg
cagcttttgccagagtttagtacagcaaatgctggcttgctctatgacttccagcttatt
aatgttgaagattttcagggagttggagaatctgagcctaatccttacttttatcagaat
cttggagaggcagaatatgtagtggcactttttatgtacatgtgtttacttggttaccct
gctgacaaaatcagtattctaaccacatataatgggcaaaagcatcttattcgggacatc
atcaacagacgatgtgggagcaatccattgattggaagaccaaataaggtgacaactgtt
gacagatttcaaggtcaacagaatgattatattcttctctctctagtacgaaccagggca
gtgggccatctgagggatgttcgtcgcttagtagtggccatgtctagagccagacttgga
ctttatatcttcgccagagtatccctcttccaaaattgttttgaactaactccagccttc
agccagcttacagcccgcccacttcatttgcatatcattccaacagaacctttcccaacc
agtagaaagaatggagaaagaccatctcacgaagtacagataataaagaatatgcctcag
atggcaaattttgtatacaacatgtatatgcatttgatacagaccacacatcattatcat
cagactttattacagctaccacctgctatggtagaagaaggtgaggaagttcaaagtcag
gatacagaattggaaacagaagaagaggccatgcctgctccagctgacatcatgcctact
ctaatggatgccagctccagtcaagaagcctcagcctctcagactgaacccacctccaat
gagactgagaccacctccagtcagacaggagctgattccaatccagaagccacccctgcc
gaatctaagatcactgctactgcggcaggacctgtagctacaccagcagagaataacacc
cctcctgatgccacatctgcccctggagaaaccaagtag
DBGET
integrated database retrieval system
