Sus scrofa (pig): 100738472
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Entry
100738472 CDS
T01009
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100738472 (RLIM)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100738472 (RLIM)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100738472 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
100738472
NCBI-ProteinID:
XP_003135236
Ensembl:
ENSSSCG00000012419
ENSSSCG00000028538
UniProt:
A0A4X1VW78
F1RPK6
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All DBs
Position
X:complement(59889799..59920464)
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AA seq
623 aa
AA seq
DB search
MESSDSNDKGSGDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEST
EEELLRRLQQIKEGPPPQNSDENRGGDSSDDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGSQNPENENEPSARRSSGESMDNNSQRQVENPR
SESASTRPPRSERNSTEALTGEVPPTRGQRRARSRSPDHRRTRARAERSRSPLHPMSEIP
RRSHHSISSQTFEHPLVNETEGSSRTRHHVTLRQQISGPDLLSRGLFAASGTRNASPGAG
SSDTTGNGESAGSGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYESE
RGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYF
MYSDSDSEPSGSVSSRNMERAESRNGRVGSGGSSSSGSSSSSSSSSSSSSSSSSSPSSSS
SGESSETSSEVFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFLLNEDD
DDQPRGLTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWL
SENSTCPICRRAVLASGNRESIV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctaacgataaaggaagtggtgatcagtctgcagcacagcgcaga
agtcagatggaccgattggatcgggaagaagctttctatcaatttgtaaataatctcagt
gaagaagattataggcttatgagggataacaatttgctaggcaccccaggtgaaagtact
gaggaagagttactaagaagactacaacaaattaaagagggcccaccaccgcaaaactca
gatgaaaatagaggtggagactcttcagatgatgtgtctaatggtgactctataatagac
tggcttaactcagtgagacaaactggaaatacaacaagaagtgggcaaagaggaaaccaa
tcttggagagcagtgagccggactaatccaaacagtggtgatttcagattcagtttagag
atcaatgttaatcgtaataatgggagccaaaatccagagaatgaaaatgaaccatctgca
agacgttctagtggagaaagtatggacaacaacagccaaaggcaagtagaaaatccacga
tctgagtcagcatctacaaggccacccagatcagaacgaaattcaactgaagcattaaca
ggagaagttccacctaccagaggtcagagaagggcaagaagcaggagcccagaccatcgg
agaaccagagcaagagctgaaagaagtaggtcacccctgcatccgatgagtgaaattcca
cgaagatctcatcatagtatctcatctcagacttttgagcatcctttggtaaatgagact
gagggaagttctagaacccggcaccacgtgacattgagacagcaaataagtggacctgat
ttgctaagtagaggtctctttgcagcttctggaacaagaaatgcctcaccaggagcaggc
tcttcagacacaactggcaatggtgaatctgcaggatcaggacagagacctccaactata
gtccttgatcttcaagtaagaagagttcgtcctggagaataccgacagagagatagcata
gctagcagaactcggtcaaggtctcaaacaccaaacaacactgtcacttacgaaagtgaa
cgaggaggttttaggcgtacattttcacgttctgagcgagcaggtgtgagaacctatgtc
agtaccatcagaattccaattcgtagaatattgaatactggtttaagtgagactacatct
gttgcaattcagaccatgttaaggcagataatgacaggttttggtgagttaagctacttt
atgtacagtgacagtgattcagagcctagtggctcagtctcgagtcgaaatatggaaagg
gcagagtcacggaacggaagagtgggttctggtggtagtagcagttctggttccagttcg
agttccagttcaagttccagttccagttctagttcaagttccagtcctagttccagttcc
agtggtgaaagttcagagactagctcagaggtgtttgaaggcagtaatgaaggaagctca
tcatcaggctcatcaggtgccaggcgagagggtcgacacagggccccggtaacatttgat
gaaagtggctctttgcccttccttagtctggctcagttcttcctcttaaatgaggatgat
gatgaccaacctagaggactcaccaaagaacagattgacaacttggcaatgagaagtttt
ggtgaaaacgatgcattaaaaacctgtagtgtttgcattacagagtatacagaaggcaac
aaacttcgtaaactaccgtgttcccatgagtaccatgtccactgcatcgatcgctggcta
tctgagaattctacttgtcctatttgtcgcagagcagtcttagcttctggtaacagagaa
agcattgtgtga
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