Sus scrofa (pig): 100738802
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Entry
100738802 CDS
T01009
Symbol
BCAN
Name
(RefSeq) brevican core protein isoform X2
KO
K06795
brevican
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssc00535
]
100738802 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
ssc00536
]
100738802 (BCAN)
04091 Lectins [BR:
ssc04091
]
100738802 (BCAN)
Proteoglycans [BR:
ssc00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
100738802 (BCAN)
Glycosaminoglycan binding proteins [BR:
ssc00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
100738802 (BCAN)
Lectins [BR:
ssc04091
]
C-Type lectins
Lecticans
100738802 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
EGF_2
Ig_2
ig
I-set
EGF_3
Izumo-Ig
Ig_3
Motif
Other DBs
NCBI-GeneID:
100738802
NCBI-ProteinID:
XP_003481480
Ensembl:
ENSSSCG00000006477
UniProt:
F1RP38
A0A8D0QRR0
LinkDB
All DBs
Position
4:complement(93432331..93450895)
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AA seq
906 aa
AA seq
DB search
MAPLFLPLLAALALAPVPAALADALEGDSSEDRAFRVRIAGDAPLQGVLGGALTIPCHVH
YLRPPPSRRAALGSPRVKWTFLSRGREAEVLVARGLRVKVSEAYRFRVALPGYPASLTDV
SLVLSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFLYREGSARYAFSFTGAQEACA
RIGARIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQTPREACYGDMDGFPGVRNYGVV
DPDDLYDVYCYAEELNGELFLGAPPDKLTLEEARAYCQERGAEIATTGQLYAAWDGGLDR
CSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFLFPNQTGFPNKHSRFNVYCFRDSTQPS
AIPEASNPASDLASDALEAIVTVTETLEELQLPQEAVESESRGAIYSIPIMEDGGGGSST
PEDPAEAPRTLLEFETQSIVTPLGSSEEESQVLEEEEKFEEEEEEEEVEDKALWAWPSEP
GSLHPEATLPTESAPEESLSQASPPARAVLQPGASSPPYGEPEAPRPPRVLGPPTETPPT
PREGNLASPPSSTLVGARDIGVDTGGPELSGVPRGESEETGSSEDAPSMLPATRAPEGTR
ELEIPSEEHSGRTVPAGTSVRAQPVLPTDSASRGGVAVAPSSGDCVPSPCHNGGTCLEEE
EGVRCLCLPGYGGDLCDVGLRFCSPGWDSFQGACYKHFSKRKSWEEAENKCRMYGAHLAS
ISTPEEQDFINNQYREYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCV
VMVWHDQGQWSDVPCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVLRYRCR
EGLTQRNLPLIRCQENGRWETPQISCVPRRPARALHPVKAPEGRQRRLLGHWKTRSTPPP
NPASGP
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggccccactgttcctgcccctgctggcagcactggctctggccccggtccctgcggcc
ttggctgatgctctggaaggggacagctcagaggaccgggccttccgcgtgcgcatcgcc
ggcgacgcgccgctgcagggcgtgctgggtggcgccctcaccatcccgtgccacgttcac
tacctgcggccgccgccgagccgccgggccgcgctgggctccccgcgggtcaagtggacc
ttcctgtctcggggccgggaggccgaggttctggtggcgcgggggctgcgcgtcaaggtg
agcgaggcctaccggttccgcgtggcactgcctgggtacccggcgtcactcaccgatgtc
tccctggtgctgagcgagctgcggcccaacgactcgggcatctaccgctgcgaggttcag
cacggcatcgatgacagcagcgacgctgtggaggtcaaggtcaaaggggttgtctttctc
taccgagagggctctgcccgctacgctttctccttcactggggcccaggaagcctgtgcc
cgcatcggagcccgaatcgccactccggagcagctctatgccgcctacctcgggggctat
gaacagtgtgatgctggctggttgtctgaccagactgtgaggtatcccatccagactcca
cgagaggcctgttatggagacatggatggcttccctggggtccggaactatggagtggta
gacccggatgacctctatgatgtctactgttatgctgaagaattaaatggagagctgttt
ctgggtgcccctccagacaagctgacgttggaggaggcacgtgcatactgccaggagcgg
ggtgccgagattgcaaccacgggccagctgtatgcagcctgggatggtggcctggaccgc
tgcagcccaggctggctggctgatggcagtgtgcgctaccccatcgtcacacccagccag
cgctgtggtgggggcctccctggtgtcaagactcttttcctctttcccaaccagacgggc
ttccccaacaagcacagccgcttcaacgtctactgcttccgagactctactcagccctct
gccatccctgaggcctccaacccagcctctgatctggcctctgatgcactggaagcaatt
gtcacagtgacagagaccctggaggagctgcagctgcctcaggaagctgtggagagtgag
tcccgaggagccatctactccattcctatcatggaagatggaggaggtggaagctccact
ccagaggacccggcagaggccccgaggacccttctagagtttgaaacccaatccattgta
acccccctggggtcctcagaagaggaaagccaagtgttggaggaagaagagaaattcgag
gaagaagaagaagaggaggaggtggaggataaggcgctgtgggcctggcccagcgagcct
ggcagtctgcacccagaagccactctccccaccgagtcagctccagaggagtcactctcc
caggcatccccaccagcaagggcagtcctacagcctggtgcatcatcacctccttatgga
gagccagaggctcccaggcctccaagggtccttggaccacccacggagaccccgcccact
cccagggaggggaacctggcatccccaccatcttccactctggttggggcaagagacata
ggggtggatactgggggtcctgagctgtctggggtccctcgaggagagagtgaagagaca
gggagctccgaggatgccccttccatgcttccagccacacgggcccctgagggtaccagg
gagctggagatcccctctgaagaacattctggaagaactgtcccagcagggacttcagtg
cgggctcagccggtgctgcccactgacagtgccagccgtggtggagtggccgtggccccc
tcatcaggtgactgtgtccccagcccctgtcacaatggtgggacgtgcttggaggaggag
gagggggtccgctgcctatgtttgcctggctatgggggggacctgtgcgatgttggcctc
cgcttctgcagccctggctgggactccttccagggcgcctgctacaagcacttttctaag
cgaaagagctgggaagaggcggaaaacaagtgccggatgtacggcgcgcacctggccagc
atcagcacgccggaggaacaggacttcatcaacaatcaataccgggagtaccagtggatt
gggctcaacgataggaccatcgaaggcgatttcctgtggtcagatggcgtccccttgctc
tatgagaactggaacccagggcagccagacagctacttcctgtccggagagaactgcgtg
gttatggtgtggcacgatcagggacaatggagcgatgtgccctgcaactaccacctgtcc
tacacctgcaagatggggctggtgtcctgtgggcccccaccggagctgcccctggctcaa
gtgtttggccgtccacggctgcgctatgaagtagacacggtgcttcgttaccggtgtcgg
gagggactgacccagcgcaacctgccactgatccgctgccaggagaatggtcgctgggag
acccctcagatctcctgtgtgccccgcaggcctgctcgagctctgcacccagtaaaggcc
ccagagggacgtcagaggaggctactggggcactggaagacacggtcaaccccccctccc
aatcctgcttcaggtccctaa
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