Sus scrofa (pig): 100739275
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Entry
100739275 CDS
T01009
Symbol
SPOCD1
Name
(RefSeq) LOW QUALITY PROTEIN: SPOC domain-containing protein 1
KO
K17596
SPOC domain-containing protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
100739275 (SPOCD1)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100739275 (SPOCD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOC
TFIIS_M
DUF1639
DUF3275
Motif
Other DBs
NCBI-GeneID:
100739275
NCBI-ProteinID:
XP_020953261
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Position
6:complement(88323119..88349194)
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AA seq
1152 aa
AA seq
DB search
MSWQVAVEGSSAEDPVLSPRDSCGLFQEDVEETGSQSGLAPHXAGGSSGAPVWAGSRKRV
HPEEALQGASCQAVGAPGASVEAKARLVVPALQAVGQRQDLLPGPRLHIQLPTVPAQGRA
QTCKRLLVSLHDILAGSGPRNLWSMSVGARKKSRMCEAPLEGEEGAGGLCLGQSPGGDKP
QSGGGLSHGADVESVGVSCRPLSCKDTGSGPADPGGSWEECASGIEKLESLPIAGDGAPP
DTPCAPVEPPVSSGGEFPQPATQAPPQSPALCLGESGKASPEWQEAGQSLGAGGEDGPDT
SHDQEELEVEAQPVSGGRPEQGLTASTDTSASSLEPAASKARSGQAAGQRRYKYATKLRR
GPVPCAQDGDTERCSDHSNQEQPEESSPGGCPKLEAMKMAYGVKHVCYVGSTAVIHLLGG
IRDGQAGDSLSPKLEVLEDMMEISSASPAQRPRRKDRPMIQGPKGNQCSPVEGEEKPDEQ
NGAEDSAQLWPQQEKLPLDAGVRSTVVRAMREVLWSRLQELPDLVLSEGAVEGLAAGIEA
ALFDLTHATNGHYRTKYRSLLFNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQLAPQELA
RWRDQEEKRGLEIIEQLQKEPCSLPASKLTHKGEVEIPRDVDQTLILEDLVGSMVSVDCG
PLAPPATSKDTTEQHEDTTEQHKHHFQDSSCRICMGGKETWEGLRDEGPGLGVGFNDNRG
SGLGEKVAGLAAGPRLSSCLYSAGWKPSCELPSSKTATGMGDSAFQRAPSLVPAASPEMP
QAREKSPMESQDRLQMPPGPTKVLSNQLPWEGSLDMFSIKRFRVRAQLVSGHSCQLIQAL
PQVIRSAGCIPPNTVWDFLASVCPAKAKDVCVVRLCPQGSPDTQNCHLLYSYLNNKQRHG
LVAVEQVGVVLLPLPAFQPLPSRLRPLGGPGLEATHPSLLLAVLFPKAGLPATAEYSPLT
GKVRRMTSFNRKVEMKCYQLEDRRPNVALKGSSCLGGALQQSQGKGSLAPRGICTWQSAP
RGRGRLSGEPETWQGVGRGQRPPKPDWCQSWHPYAAVPAGRGQHLHSASCPHQKLLQHLE
SLVAMSHQLQASLRSPGQEQLLQPPVQSSAGAGVLGLLCKPPAAPEPPGLAPNSSLGPTD
GADSECPLPGET
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggcaggtggctgtggagggctccagcgcagaggaccctgttctcagcccccga
gacagctgtgggctcttccaggaggatgtggaagaaaccggctcccagtcaggcctggcc
ccacacnctgcaggaggaagctctggggctccagtttgggctggcagcaggaagagggtc
cacccggaagaggcccttcaaggtgccagctgccaggctgtgggtgcacctggggccagt
gtggaggccaaggcccgcctggtggtccctgcgctgcaagctgtgggacagaggcaggac
ttgctgcctggccccaggctccatatccagttgcccacagtgcctgcccaggggagggcc
cagacctgcaagaggctcctggtttctctccatgacatcttagctggcagtgggcccagg
aatctttggagcatgtctgtgggggcaagaaagaaaagcaggatgtgtgaggccccctta
gagggtgaggagggggctggcggcttgtgtcttggccagagccctggtggggacaagccc
cagtctgggggaggcctctcacatggtgctgatgtggagtctgtgggagtttcttgcagg
ccactttcttgcaaggacactgggtctgggcctgcagacccaggcggaagttgggaggag
tgtgcctcagggattgagaagttggaatctttgcccattgcaggggatggggccccacca
gacacaccctgtgcccctgtcgagcccccagtgtccagtggaggagagttccctcagcca
gctacccaggctcctccacagagcccggcactgtgcctgggagagtctggaaaggcttcc
ccagagtggcaagaagcagggcagagcttgggggctggtggtgaggatggccctgacacc
tcacatgaccaggaggagctagaggtcgaggctcagccagtgtctggagggaggccagag
cagggactcactgcttccacggacacctctgccagctccctggagcctgcagccagcaaa
gctagatcaggccaggccgcagggcagagaagatacaagtatgctacaaagctgagaagg
gggccagtgccctgtgcccaggatggggacactgagagatgctcagaccactccaaccag
gagcaaccagaggagtccagcccaggaggctgccccaaactggaggcaatgaaaatggcc
tatggggtgaagcatgtgtgctatgttggttccacggcagtgatccacctcctggggggc
atccgcgacggccaggcaggggactcactgtctccaaagctggaggttctggaggacatg
atggaaatcagctcagcctcacctgcgcagaggcccagaaggaaggacaggcccatgatc
cagggccccaaggggaaccagtgcagcccagtggagggcgaagagaagcctgatgaacaa
aatggggcagaggactcagctcagctctggccccagcaggaaaagctacccctggatgct
ggggtacggagcaccgtggtccgtgccatgcgggaggtgctgtggagtcgccttcaggag
ctcccagacctggtgctgagtgagggggctgtggagggcctcgctgctggcatcgaggct
gccctcttcgacctgacacatgccaccaacggccactacaggaccaagtaccgcagcctg
ctcttcaatcttcgggaccccaggaacccagacctgtttctcaaagtgattcatggagat
gtcaccccccaaggcctggtgcggatgaactcagtgcaactggccccccaagagctggcc
cgctggcgggaccaggaggagaagaggggcctggagatcattgagcagctccagaaggag
ccatgcagcctcccagcctccaaactgacccacaagggggaagtcgagatcccgcgggac
gtggaccagacgctgatcctggaggatctggtgggatccatggtgtctgtcgactgcggc
ccactggccccacctgccacatccaaggacaccacagagcagcacgaggacaccacggag
caacacaaacaccacttccaagactccagctgccgcatctgcatgggtgggaaggagaca
tgggaggggctcagggatgaggggccggggctgggcgtggggttcaatgacaacaggggt
tccgggcttggggagaaggtggcaggcctagctgctggcccccgtctcagctcctgcctc
tactctgcaggctggaagccctcgtgtgagctaccatcctccaaaactgccacagggatg
ggggacagtgccttccagagagccccaagcctagtccctgcggcctctccagagatgccc
caagccagggagaagtctcccatggagtcccaggacaggctccagatgcctcctgggccc
acaaaggttctgtccaaccagctgccctgggaagggtctctggacatgttctccatcaag
cggttccgggtcagggcccagctggtttcgggacacagctgtcagctcatccaggccctg
ccccaggtgatccgctccgcaggctgcatcccccctaacactgtctgggactttctggcc
agcgtctgtccagccaaggccaaggatgtctgcgtggtcagactgtgcccacagggctct
ccggacacccagaactgccacctgctctattcctatctcaacaacaagcaacgccatggc
ctggtggctgtggaacaggtgggggtggtcctgctgcccctgcctgccttccagcctctg
ccctccaggctgcgccctcttggaggcccaggtctggaagccactcacccaagcctgctg
ctggctgtgctgttccccaaggcagggcttccagccacagcagagtacagccccttgacg
gggaaggttcgcagaatgacctccttcaacagaaaggtggagatgaaatgttaccagctg
gaggacaggaggccaaatgtggctctgaagggctcttcttgcctaggaggtgccctgcag
cagagtcagggaaaaggcagcctggctccaaggggaatttgtacttggcagagtgccccc
agaggcagggggaggctgtcgggagagcctgaaacctggcagggtgttgggcgagggcag
cggcctccaaaaccagactggtgccagtcttggcatccctatgcagcagtaccagctggc
cgtggccagcacctccacagtgcttcttgtccccaccaaaagctgctccagcatctggaa
tctttggtggccatgagccaccagctccaagcctccctgaggtccccaggccaggaacaa
cttctccaaccccctgtccagtcttctgcaggtgctggagttcttggtctcctctgcaag
ccccctgcagctccagagccccctgggctagcccctaactcctccttgggccctacagat
ggagctgactctgaatgtccccttcctggagagacctga
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