Sus scrofa (pig): 100739486
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Entry
100739486 CDS
T01009
Symbol
SUPT20H
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100739486 (SUPT20H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100739486 (SUPT20H)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100739486 (SUPT20H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
100739486
NCBI-ProteinID:
XP_020920878
LinkDB
All DBs
Position
11:complement(12825758..12864935)
Genome browser
AA seq
859 aa
AA seq
DB search
MQQALELALDRAEYVIESARQRPPKRKYLSSGRKSIFQKLYDLYIEECEKEPEVKQKLRR
NVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEE
LPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSNNMKSPGYQSRHILLRPTMQTLICDVHS
ITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKMNTRPMKRCFK
RYSRSSLNRQQDLSHCPPPPQLKLLDFLQKRKERKAGQHYDLKISKAGNCVDMWKRSPCN
LSVPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDIKDDYVFECEAGNQYQKTKLTILQSLG
DPLYYGKIQPCKEDEESDSQISPSHFSTDDHSNWFIIGSKTDAERVVNQYQELVQNEAKC
PVKMSHSSSGSASLSQLSPGKETEQPETVSVQSSVLGKGLKHRPPPIKLPSSSGNSSSGN
YFTPQQASSFLKSPTPPPASKPPSLSRKSSVDLNQVSMLSPAALSPASSSQRSGTPKPST
PTPTPSSTPHPPDAQSSTPITPSATPTPQDSGFTPQPTLLTQFAQQQKSLSQAMPVTTIP
LSTMVTSITTGTTATQVMANSAGLNFINVVGSVCGAQALMSGSNPVLGCNTGAITPAGIN
LSGLLPSGGLLPNALPGTMQAASQAGVPFGLKNTSSLRPLNLLQLPGGSLIFNTLQQQQQ
QLSQFTPQQPQQPTTSSPQQPGEQGSEQSSASQEQALSAQHAAVINLAGVGSFMQPQAAV
LSQLGSAENRPEQSLPQQRFQLSSAFQQQQQQIQQLRFLQHQMAMAAAAAQTAQLHRHRH
TGSQSKSKMKRGTPATPKF
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagctttagaactagctttggatcgtgcagagtatgtcattgaaagtgcccga
caaagacctcctaaaaggaaatatctatctagtggaagaaaatctatatttcaaaaactt
tatgacttatatattgaagaatgtgaaaaagaacctgaggttaagcagaaattaagaaga
aatgtgaacttgttagagaagcttgttatgcaagagacgttgtcatgtttagtggtcaac
ctgtatccaggaaatgaaggatactcactgatgctcaggggaaaaaatggatcagattct
gagaccattcgactgccttatgaagaaggggaattgcttgaatacttggatgcagaagaa
ttacctcctattttggttgatctcctagaaaaatctcaggttaatatttttcattgtgga
tgtgtcatagcagaaatacgtgactacaggcagtcaaataatatgaaatctcctggttac
caaagtaggcacattctcttacgtccaacaatgcagacgctaatctgtgatgtgcactca
ataacaagtgataaccataaatggacccaggaagacaaacttttgcttgagagccagttg
attctagctacagccgaaccactgtgtcttgatccttctatagccgtaacctgcactgca
aacagattgctctataataagcaaaagatgaacacgcgcccaatgaaacggtgtttcaag
agatattccagatcctctctgaaccggcagcaggatctgtctcattgtccacctcctcct
cagctaaaattacttgatttcttacaaaaaaggaaggaaagaaaagcaggtcagcattat
gacctcaaaatctctaaagcaggaaattgtgtagatatgtggaaacggagcccctgtaat
ttgtccgtaccttctgaagtggatgtagaaaaatatgccaaagtggaaaagtctatcaaa
tctgatgactcacaaccaacagtctggccagcccatgatataaaagatgattatgtattt
gaatgtgaagctggtaatcagtatcagaaaacaaagctgaccattttgcagtcacttggt
gatccactttactatggtaaaatacagccatgtaaagaagatgaagaaagtgacagtcag
atatctccatcccacttctccacagatgatcattcaaattggttcattattggatcaaag
actgatgctgagagagtagtcaatcagtaccaggaattggtccagaatgaagccaaatgt
ccagtgaagatgtcacatagctccagtggctcagccagcttgagtcagctttctccaggg
aaagaaacagaacagcctgagaccgtgtcagttcagtcttcagtactaggaaagggacta
aaacatcgacctccgcccatcaaacttccctcaagctcagggaatagttcttcaggtaac
tattttacaccacaacaggccagcagctttcttaaatctccaactcctcctcctgcttct
aagccacccagtctttctcggaagtcatctgtggatctcaatcaagttagcatgctttct
ccagctgccctctcacctgccagttcatcacaaagatctggaactcctaagccatctact
cctacaccaaccccttcatcgaccccacaccctcctgatgctcagagttcaactcctatt
accccttcagctacccctactccccaagattcaggcttcacccctcagcccactttgtta
actcagtttgctcagcagcaaaagtctctgagccaggcaatgcctgtaacgaccattcct
ctttccaccatggtaacatccataactacaggaaccacggccacccaggtcatggcaaac
tctgctggacttaacttcatcaatgtagtgggctctgtttgtggagctcaagccttgatg
agtggttcaaaccctgtgctgggctgtaacactggtgccataactcctgcaggaataaac
ctgagtggccttctaccctcaggaggtctgctaccaaatgcattgcccggtacaatgcag
gcagcttctcaagcaggtgttccatttggtttaaaaaatacttcaagtctcaggccctta
aatctacttcagcttccaggtggttcgctcatttttaacactctacagcagcagcaacag
cagctttctcagtttacaccacagcaacctcaacaacccacaacttccagtcctcaacag
ccaggggagcagggttctgaacaaagttcagccagtcaagaacaggccttatctgcacag
catgctgccgttattaaccttgccggagtaggaagttttatgcagccacaggcagctgtg
ttgtctcagcttggctctgccgagaacagacctgagcaaagccttcctcagcagagattc
cagctctcctctgcctttcaacagcagcagcaacagatccaacagttgcgattcttgcag
catcaaatggctatggcagcagcagcagcacaaacagctcagctacatcggcatcggcat
acaggcagccagtcaaaaagtaaaatgaaaagaggcacaccagccactccaaaattctga
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