KEGG   Sus scrofa (pig): 102158045
Entry
102158045         CDS       T01009                                 
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03040  Spliceosome
ssc05202  Transcriptional misregulation in cancer
ssc05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102158045 (DDX5)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    102158045 (DDX5)
   05205 Proteoglycans in cancer
    102158045 (DDX5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssc03041]
    102158045 (DDX5)
   03009 Ribosome biogenesis [BR:ssc03009]
    102158045 (DDX5)
Enzymes [BR:ssc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102158045 (DDX5)
Spliceosome [BR:ssc03041]
 Complex A
  U1 snRNP components
   U1 related factors
    102158045 (DDX5)
 Complex B
    102158045 (DDX5)
Ribosome biogenesis [BR:ssc03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    102158045 (DDX5)
SSDB
Motif
Pfam: DEAD Helicase_C P68HR ResIII Helicase_C_2 ERCC3_RAD25_C Cas3-like_C_2 BNIP2
Other DBs
NCBI-GeneID: 102158045
NCBI-ProteinID: XP_020922417
UniProt: A0A8D0S776
LinkDB
Position
12:14571712..14580740
AA seq 659 aa
MRDKGGSAAPAGTPPGRLRPAGTPPPVVSNASFSFSLRLYNFATLIAVLSGASLQVIRLA
FGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVET
YRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMV
GVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACR
LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLD
MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQ
IVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDK
SQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARS
TKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGLKDDRRD
RYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANYTNGSFGSNFVSAGIQ
TSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAAAPMIGYPMPTGYSQ
NT seq 1980 nt   +upstreamnt  +downstreamnt
atgcgagacaaagggggaagcgccgccccagcgggaacgccgcccggccgactccgcccg
gcagggactcctcccccggtagtctccaacgcctccttttctttttccttacgtttatat
aattttgctaccttgatcgcggtcctttctggggcatctctccaagtcattcggcttgcg
tttggtgcgcctcgatttggaggaagtagggcagggcccttatctggaaagaagtttgga
aaccctggggagaaactggttaaaaagaagtggaatcttgatgagctgcccaaatttgag
aagaatttttatcaagaacaccctgatttggctaggcgaacagcacaagaggtagagaca
tacagaagaagcaaggaaattacagttagaggtcacaactgcccaaagccagttctgaat
ttttatgaagcaaactttcctgcaaacgtaatggatgtgattgcgaggcagaactttact
gaacccactgctattcaagctcagggatggcctgttgctctaagtggattggatatggtt
ggggtagcacaaactggatctgggaaaacattatcttatttgctccctgctattgtccac
atcaatcatcagccattcctagagagaggtgatggacctatttgcttggtgctggcacca
actcgagaactggcccaacaggtacagcaagtagctgctgaatactgtagagcgtgtcgc
ttgaagtccacctgcatctacggtggtgctcctaagggaccacagatacgtgatttggag
agaggtgtggaaatctgtatcgcgacacctggaagactgattgactttttagaatgtggg
aaaaccaatctaagacggaccacctaccttgtccttgatgaagcagatagaatgctggat
atgggattcgaaccccaaataaggaaaattgtggatcagataagacctgataggcaaacc
ctcatgtggagtgctacttggccaaaagaagtaagacagctcgctgaagatttcctgaaa
gactatattcatataaacattggtgcactagaactgagtgcaaatcacaacattcttcag
attgtggatgtgtgtcatgatgtggaaaaggatgaaaaacttattcgcctaatggaagag
atcatgagtgagaaggaaaataaaaccattgtttttgttgaaaccaaaagaagatgtgat
gaacttactaggaaaatgaggagagatgggtggcctgccatgggtatccatggtgacaaa
agtcaacaggaacgtgactgggttctaaatgaattcaaacatggaaaagctcctattctg
attgctacagatgtggcctccagagggctagatgtggaagatgtgaaatttgtcatcaat
tatgactaccctaactcctcagaggattatattcatcgaattggaagaactgcccgcagt
accaaaacaggcacagcatacactttctttacacctaataacataaagcaagtgagcgac
cttatctctgtgcttcgtgaagctaatcaggcaattaatcccaagttgcttcagttggtc
gaagacagaggttcaggtcgttccaggggtagaggaggcctgaaggatgaccgtcgggac
agatactctgcgggcaaaaggggtggatttaatacatttagagacagggaaaattatgac
cgaggttactctagtttgcttaagagagattttggagcaaaaactcagaatggtgtttac
agtgctgcaaattacaccaatgggagctttggaagtaattttgtgtctgctggtatacag
accagttttaggactggtaatccaacagggacttaccagaatggttatgatagcactcag
caatatggaagtaatgttccaaatatgcacaatggtatgaaccaacaggcatatgcatat
cctgctactgcagctgcacctatgattggttatccgatgccaacaggatattctcaataa

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