Sus scrofa (pig): 102159116
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Entry
102159116 CDS
T01009
Symbol
GPC6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssc00535
]
102159116 (GPC6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssc00537
]
102159116 (GPC6)
Proteoglycans [BR:
ssc00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
102159116 (GPC6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssc00537
]
Others
102159116 (GPC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
102159116
NCBI-ProteinID:
XP_020921030
Ensembl:
ENSSSCG00000009489
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All DBs
Position
11:62436143..63560908
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AA seq
565 aa
AA seq
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MPSWIGAVILPLSGLLLSLPAGADVKARSCGEVRQAYGAKGFSLADIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPTVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARAVPENF
NTRFRPYNPEERPTTAAGTSLDRLRIVWRTMQHSVTDIKEKLKLSKKVWSALPYTICKDE
SVTAGTSNEEECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVM
TNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREVDSS
AAQPGPSLLSGCLVCIALVSQRLCR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttggatcggggctgtgattcttcccctctccgggctgctgctgtccctcccg
gccggggcggatgtgaaggctcggagctgcggcgaggttcgccaggcgtacggtgccaag
ggattcagcctggcggacatcccctaccaggagatcgcaggggagcacctaagaatttgt
cctcaagagtacacctgctgcaccacagaaatggaagacaagctaagccagcaaagcaaa
ctggagtttgagaacctggtggaagaaacgagtcactttgtccgcaccactttcgtgtcc
aggcacaagaaatttgatgaatttttccgagagctcctggagaatgccgaaaagtcccta
aatgatatgtttgtacggacctatggaatgctctacatgcagaattccgaggtattccag
gacctcttcacagagctgaaaagatactacacagggggcaatgtcaatctggaggagatg
ctcaatgacttctgggcccggctcctggaacggatgtttcagctgatcaacccgcagtat
cacttcagtgaggactacctggaatgcgtgagcaaatacacagaccagctgaagcccttt
ggagatgttccccggaagctgaagatccaggtcacccgcgccttcattgctgctcggacc
tttgtccaggggctgaccgtcggcagagaagttgcaaatcgagtttccaaggtcagccca
accccaggatgcatccgtgctctgatgaagatgctgtactgcccttactgtcgaggactt
cccacagtgagaccgtgcaacaactactgcctcaatgtcatgaagggctgcctggccaat
caggctgatcttgacacggagtggaatctgttcatagacgccatgctcttggtagcagag
cgactggagggacccttcaacattgagtcggtcatggacccaattgatgtgaagatctct
gaagccatcatgaacatgcaagaaaacagcatgcaggtgtctgcaaaggtctttcaggga
tgtggccagcccaaacctgccccagctctcagatctgcccgcgcagttcctgagaacttt
aatacacggttcaggccttacaatcctgaggaaagaccaaccactgctgcaggcacgagc
ttggaccggctgaggattgtgtggaggacaatgcaacatagtgtcacagacattaaagag
aaactgaagctctctaaaaaggtctggtcggcactgccctacaccatctgcaaggacgag
agcgtgacggcgggcacgtccaacgaagaggaatgttggaacgggcacagcaaagccaga
tacttgcctgagatcatgaatgacgggctgaccaaccagatcaacaaccccgaggtggac
gtggacatcacgcggcccgacacgttcatcaggcagcagatcatggctctccgcgtgatg
accaacaagctgaagaatgcctacaacggcaatgacgtcaacttccaggacacaagcgat
gaatccagtggctcggggagtggcagtggctgcatggatgacgtgtgtcctacagagttt
gagtttgtcactacagaggcccctgcagtagatcccgacaggagagaagtagactcttct
gcagcgcagccggggccctccctgctctcaggatgtctcgtctgcatcgccctggtgtcg
cagagactgtgcagataa
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