KEGG   Sus scrofa (pig): 102160500
Entry
102160500         CDS       T01009                                 
Symbol
SHANK2
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 2
  KO
K15009  SH3 and multiple ankyrin repeat domains protein
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04724  Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    102160500 (SHANK2)
SSDB
Motif
Pfam: Ank_2 Ank SAM_1 SAM_2 Ank_4 Ank_3 Ank_5 SH3_2 SH3_9 PDZ_6 PDZ FERM_f0 SH3_1 SAM_4 PI3K_rbd SAM_PNT
Other DBs
NCBI-GeneID: 102160500
NCBI-ProteinID: XP_020938304
LinkDB
Position
2:2517853..3016959
AA seq 1857 aa
MFSRKTPAVMPRSPTSSEDEMAQSFSDSSEDSDSDTSREETIYDTIRATAEKPGSTRTEE
SQGNTLVIRILIEDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDILNYGLFQPASDGR
HGKFLDEERLLREYPQPTGKGIPSLEFRYKKRVYKQSNLDEKQLAKLHTKANLKKCMDHI
QHRSVEKIVKMLERGLDPNFHDLETGETPLTLAAQLDDPVEVIKALRNGGAHLDFRAKDG
MTALHKAARARNLMALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPCCCELLLHEHAAV
SCKDENGWHEIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLL
FRGGNKELKNYNSQTPFQVAIIAGNFELAEYIKNHKETDTVPFREAPAYSNRRRRPPSTL
AAPRVLLRSNSDNNLNASAPDWAVCSAATSHRSLSPQLLQQGPSKPDGVPKTVGSYIPGP
RSRSPSLNRLGGAAGEDGKRPQQPWLIGPTFPPGANKDTLSAFEYPGPRRKLYSAVPGRL
FVVVKPYQPQVDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPKDS
QAETRVDRSKKLFRHYTVGSYDSFEASSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPI
EEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGGN
HLVLKVVTVTRSLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKD
KPDEIVPAPKPSRAAEAVVAETRVATIKQRPTSRCFPSVSDMNSVFERQGIAVMTPTVPG
SPKGPFLGLPRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPP
PQAVPPSPPPPSPTAYNCPKSPTPRVYGTIKPAFNQNAAAKVSPAPRSDTVATMVREKGL
YYRRELDRYSLDSEDLYSRAAAAAAQGTFRGKRGQMPENPYSEVGKIASKAVYVPAKPAR
RKGMLVKQSNVEDSPEKTCAIAIPTIIVKEPSTSSSGKSSQASSMEIDPQASEQPGQLRP
DDSLTVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPXPRARPSTFPE
EAEFGEEDGAEPLASPTPAAAPREAENHFAGGGEAGAQGEASRPLNPTSKAKGPEGSPAV
PPKSSSTAGPENYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPRGEAPKADLNKPLY
IDTKMRPCTEAGFPPVTRQNTRGPLRRQETENKYETDRKDDKKGTLISIVDASQQKSAGL
LMVHTVDAARPDDFLEEEDEKADEETEPDHLPSEVPEGVPETEGALPMPAGPEPAATAPS
RTVTAAGSVEEAAILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFEIPDDRAAPVP
VPTDLAKQEKNDASQSPSLPSSQPANSADAKKPAGLSNCLPASFLPPPESFDAVTDSGIE
EVDSRSSSDHHLETTSTISTVSSISTLSSEGGENADTCTVYADGQAFMVDKPPVPPKPKM
KPIVHKGNALFQDALLEEDVGSFVIPPPAPPPPPGAVQPGTTKVIQPRTSKLWGDVSEIK
SPILSGPKANVISELNSILQQMNREKSAKPGAGLDLPTGTKPASLAPRGPEVMSSVSGSR
STTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSPTELSKEMLPAPLSAAAAS
PSPALSDVFGLPSQPPAGDLFGLNPAGRSRSPSPSILQQPISNKPFTAKPVHLWTKPDVA
DWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq 5574 nt   +upstreamnt  +downstreamnt
atgttttcccgaaagacaccagcagtcatgccgcggagccccacgtccagtgaggacgag
atggcccagagtttctctgactcctcggaggactccgactcggacacctccagggaagag
accatctatgacaccatccgggccactgcggagaagcccggcagcaccaggacggaggag
agccagggcaacacgctggtcatccgcatcctcattgaggacctgcagcagacgaagtgc
attcgatttaacccggatgccacggtgtgggttgcaaagcagcggattctgtgttcgctg
aaccagagcctgaaggacattctgaactacgggctgttccagccggcgagcgacgggcgc
cacggcaagttcctggatgaggagcggcttctgcgggagtacccgcagcccaccggcaag
ggcatcccctcgctggagtttcgctacaagaagcgggtgtataaacagtccaacctggac
gagaagcagctggccaagctgcacaccaaggccaatctgaaaaaatgcatggatcacatc
cagcatcggtcggtggagaagattgtcaagatgctggaacgcggcctggacccgaatttc
catgacctggagactggagagactcccctgaccttggccgcacagctggacgaccccgtg
gaggtgatcaaagccctcagaaacggcggggcccacctggacttccgagccaaagatggc
atgacagcgctgcacaaagccgcccgagccaggaacctgatggctctgaagaccctcctg
gagctgggagcgtctccggattacaaggacagttacggcctgacgccgctgtatcacacg
gctgtcgtcgggggcgacccctgctgctgtgagctgctgctccacgagcacgcggccgtg
agctgcaaggatgagaacggctggcacgagatccaccaggcctgcaggtacggtcacgtg
cagcacctggagcacctgctcttctacggggccgacatgggggcccagaacgcctcgggg
aacaccgccctgcacatctgcgccctctacaaccaggacagctgtgcccgggtgctgctc
ttccggggtggaaataaggaactgaagaactacaacagccagaccccgtttcaggtggcg
atcatcgccggcaacttcgagctggccgagtacatcaagaaccacaaggagaccgacacc
gtgcccttccgagaggccccggcgtactccaaccgcagacggcggccccccagcacgctg
gccgccccccgggtcctgctgcgttccaacagcgacaacaacctcaacgccagcgcgccc
gactgggccgtctgctccgccgccacctcccaccgcagcctctcgccacagctgctgcag
caggggcccagcaagcccgatggggtccccaagaccgtcgggagctacatccccgggccc
cgcagccggtccccttcgctcaacaggctgggcggtgccgccggcgaggacggcaagagg
ccccagcagccctggctcatcgggcccactttcccgccaggtgccaacaaggacacgctg
tctgccttcgagtacccggggcccaggcggaagctgtacagcgccgtgcccgggaggctc
ttcgtcgtcgtcaagccataccaaccccaggtcgacggcgagatcccccttcaccgtggt
gacagggtcaaagttctgagcatcggcgaggggggcttctgggaaggcagcgcccgcggc
cacatcgggtggttcccggccgagtgcgtggaggaagtccagtgcaagcccaaggacagc
caggcagaaacgcgtgtggaccgcagcaagaagctcttccggcactacacggtcggctcg
tacgacagcttcgaggcttccagtgactgcattatcgaggagaagactgtggttctgcag
aagaaagacaatgagggctttggatttgtgctccgaggggcgaaagcggatacgcccatc
gaagaattcacgccaacgccggcgttcccggccttgcagtacctggagtctgtggatgaa
ggcggggtggcctggcaagccggactaaggactggggacttcttgatcgaggtcaacagt
gagaacgtggtcaaggtcggccaccggcaggtggtgaacatgatccgccagggcgggaat
cacctggtcctcaaggtggtgacggtcaccaggagcctcgacccggacgacacagccagg
aagaaagctcccccccctccgaagcgggctccaaccacagccctcaccctgcgctccaag
tccatgacctcagagctggaggagctcgtggataaagcctccgtccggaagaagaaggac
aaacccgacgagatcgtccccgcccccaagccgtcccgagctgccgaggccgtggtggcg
gagaccagggtggccaccatcaagcagcggcccaccagccggtgcttcccgtccgtctcc
gacatgaactctgtgttcgagcgccaggggatcgccgtgatgacgcccactgttcccggg
agcccgaaaggcccgtttctgggcctccctcgaggtacgatgcgaaggcaaaaatcaata
gacagcagaatctttctatcaggaataacggaggaagagcgacagtttctggcccccccg
atgctgaagttcaccaggagcctgtccatgccggacacctcggaggacatcccgccccct
ccgcaggcggtgcccccgtctccgcccccgccctcccccaccgcctacaactgccccaag
tccccgactccgcgagtctacgggaccatcaagcccgcgttcaaccagaacgccgccgcc
aaggtgtcccccgcgcctcgctcggacacggtggccaccatggtgagggagaaggggctg
tactaccgcagggagctggaccgctactccctggactccgaggacctctacagccgcgcc
gccgccgccgccgcccagggcaccttccgcggcaagaggggccagatgcccgaaaacccc
tactccgaggtgggcaagatcgccagcaaggccgtgtacgtgcccgccaagcccgccagg
cgcaagggcatgctggtgaagcagtccaacgtggaggacagccccgagaagacgtgcgcc
atcgccatccccaccatcatcgtcaaggagccctccaccagcagcagcggcaagagcagc
caggccagcagcatggagatcgacccccaggcctcggagcagccgggccagctgcggccc
gacgacagcctgaccgtcagcagccccttcgccgccgccatcgccggggccgtccgcgac
cgggagaagcggctggaagccaggaggaactcgccggccttcctgtccacagacctgggt
gacgaggacgtgggcctggggccgcccngcccccgggcgcggccctccaccttccccgag
gaggccgagttcggcgaggaggacggcgctgagccgctcgcgtcccccacgccagcggcg
gcgcccagggaggccgagaaccactttgcgggcggtggcgaggccggggctcagggtgag
gccagcaggcccctgaaccccacatccaaagccaaggggcccgagggcagccctgcggtg
ccccccaagagcagcagcacggccgggcccgagaactacgtgcacccgctcacagggagg
ctgctggaccccagctccccgctggccctggcgctctccgcgagggacagagccatgaag
gagtcccagcagggccccaggggggaggcccccaaggccgacctcaacaagcctctctac
atcgataccaaaatgcggccctgcacggaagcaggcttccctccggtcaccaggcagaac
acgcgggggcccctgaggcggcaggagacggagaacaagtacgagaccgaccggaaggac
gacaagaagggcacgctcatcagcatcgtggacgcgtcccagcagaagtcggccgggctg
ctgatggtccacactgtggacgcggccaggccggacgacttcctggaggaagaggacgag
aaggctgacgaggaaacagagccagaccacttgccgtccgaggtgccggaaggcgtcccc
gaaaccgaaggtgctttaccgatgcccgccggccccgagcccgcggccaccgcgcccagc
aggaccgtcacggcggcgggctccgtggaggaggcggccatcctgccgttccggatccct
cccccgcccctggcgtccgtggacctggacgaggattttatcttcacggagccgctgcct
ccccccctggaatttgcaaatagttttgagatccccgatgaccgcgccgctcctgtcccc
gtccccacagacctggccaagcaggagaagaacgacgcctcccagtccccttcgttaccc
tccagccagccagccaactccgcagacgccaagaagccagctggcctctcgaactgtctg
cccgcctcgttcctgccgccgcccgagagctttgacgccgtcacggactccgggatcgag
gaggtggacagccggagcagcagcgaccaccacctcgagacgaccagcaccatctccacg
gtgtccagcatctccaccctgtcctcggagggcggggagaacgcggacacctgcacggtc
tatgcagacgggcaggcttttatggtcgacaagcccccggtacctccgaagccaaaaatg
aagcccatagtccacaaaggcaacgcccttttccaggacgcgctgctggaggaggacgtg
ggcagctttgtgatccccccgcccgcgcccccgccgccgccaggcgctgtccagcctggg
acaaccaaggtcatccagccaaggacctccaagctgtggggggacgtctcagagatcaaa
agccccattctctcaggcccaaaggcgaacgtgattagcgagttgaactcaatcctgcag
caaatgaaccgagagaagtcagcgaagccgggggcaggcctggacctgccgacgggaacc
aagcctgccagcctcgctccgagaggcccagaggtcatgagcagcgtctcaggttcgcgg
agcacgaccgtcaccttcaccgtccgccctgggacctcccagcccatcaccctgcagagc
cggcccccagactatgagagcaggacctcaggaacgagacgcgcccccagccctgtggtc
tcgccaacagagctgagcaaagagatgctgcccgcccctctgtccgcggccgctgcctcg
ccctctcccgcgctctcggacgtcttcggcctccccagccagccccccgccggggacctg
tttggcttgaacccagcgggacgcagcaggtcgccgtccccctcgatactgcaacagcca
atctccaataagcctttcacagctaagcccgtccacctgtggaccaagccagacgtggcg
gactggctggaaagcctcaacctgggtgagcataaagaggccttcatggacaacgagatc
gacggcagccacctgcccaacctccagaaggaagacctcatagacctgggagtgacgcgg
gtcgggcacaggatgaacatagagagggctctgaagcagctgctggacagataa

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