Sus scrofa (pig): 102160500
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Entry
102160500 CDS
T01009
Symbol
SHANK2
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
102160500 (SHANK2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_4
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
SAM_4
PI3K_rbd
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
102160500
NCBI-ProteinID:
XP_020938304
LinkDB
All DBs
Position
2:2517853..3016959
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AA seq
1857 aa
AA seq
DB search
MFSRKTPAVMPRSPTSSEDEMAQSFSDSSEDSDSDTSREETIYDTIRATAEKPGSTRTEE
SQGNTLVIRILIEDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDILNYGLFQPASDGR
HGKFLDEERLLREYPQPTGKGIPSLEFRYKKRVYKQSNLDEKQLAKLHTKANLKKCMDHI
QHRSVEKIVKMLERGLDPNFHDLETGETPLTLAAQLDDPVEVIKALRNGGAHLDFRAKDG
MTALHKAARARNLMALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPCCCELLLHEHAAV
SCKDENGWHEIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLL
FRGGNKELKNYNSQTPFQVAIIAGNFELAEYIKNHKETDTVPFREAPAYSNRRRRPPSTL
AAPRVLLRSNSDNNLNASAPDWAVCSAATSHRSLSPQLLQQGPSKPDGVPKTVGSYIPGP
RSRSPSLNRLGGAAGEDGKRPQQPWLIGPTFPPGANKDTLSAFEYPGPRRKLYSAVPGRL
FVVVKPYQPQVDGEIPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVQCKPKDS
QAETRVDRSKKLFRHYTVGSYDSFEASSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPI
EEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNSENVVKVGHRQVVNMIRQGGN
HLVLKVVTVTRSLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKD
KPDEIVPAPKPSRAAEAVVAETRVATIKQRPTSRCFPSVSDMNSVFERQGIAVMTPTVPG
SPKGPFLGLPRGTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPP
PQAVPPSPPPPSPTAYNCPKSPTPRVYGTIKPAFNQNAAAKVSPAPRSDTVATMVREKGL
YYRRELDRYSLDSEDLYSRAAAAAAQGTFRGKRGQMPENPYSEVGKIASKAVYVPAKPAR
RKGMLVKQSNVEDSPEKTCAIAIPTIIVKEPSTSSSGKSSQASSMEIDPQASEQPGQLRP
DDSLTVSSPFAAAIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLGPPXPRARPSTFPE
EAEFGEEDGAEPLASPTPAAAPREAENHFAGGGEAGAQGEASRPLNPTSKAKGPEGSPAV
PPKSSSTAGPENYVHPLTGRLLDPSSPLALALSARDRAMKESQQGPRGEAPKADLNKPLY
IDTKMRPCTEAGFPPVTRQNTRGPLRRQETENKYETDRKDDKKGTLISIVDASQQKSAGL
LMVHTVDAARPDDFLEEEDEKADEETEPDHLPSEVPEGVPETEGALPMPAGPEPAATAPS
RTVTAAGSVEEAAILPFRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFEIPDDRAAPVP
VPTDLAKQEKNDASQSPSLPSSQPANSADAKKPAGLSNCLPASFLPPPESFDAVTDSGIE
EVDSRSSSDHHLETTSTISTVSSISTLSSEGGENADTCTVYADGQAFMVDKPPVPPKPKM
KPIVHKGNALFQDALLEEDVGSFVIPPPAPPPPPGAVQPGTTKVIQPRTSKLWGDVSEIK
SPILSGPKANVISELNSILQQMNREKSAKPGAGLDLPTGTKPASLAPRGPEVMSSVSGSR
STTVTFTVRPGTSQPITLQSRPPDYESRTSGTRRAPSPVVSPTELSKEMLPAPLSAAAAS
PSPALSDVFGLPSQPPAGDLFGLNPAGRSRSPSPSILQQPISNKPFTAKPVHLWTKPDVA
DWLESLNLGEHKEAFMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atgttttcccgaaagacaccagcagtcatgccgcggagccccacgtccagtgaggacgag
atggcccagagtttctctgactcctcggaggactccgactcggacacctccagggaagag
accatctatgacaccatccgggccactgcggagaagcccggcagcaccaggacggaggag
agccagggcaacacgctggtcatccgcatcctcattgaggacctgcagcagacgaagtgc
attcgatttaacccggatgccacggtgtgggttgcaaagcagcggattctgtgttcgctg
aaccagagcctgaaggacattctgaactacgggctgttccagccggcgagcgacgggcgc
cacggcaagttcctggatgaggagcggcttctgcgggagtacccgcagcccaccggcaag
ggcatcccctcgctggagtttcgctacaagaagcgggtgtataaacagtccaacctggac
gagaagcagctggccaagctgcacaccaaggccaatctgaaaaaatgcatggatcacatc
cagcatcggtcggtggagaagattgtcaagatgctggaacgcggcctggacccgaatttc
catgacctggagactggagagactcccctgaccttggccgcacagctggacgaccccgtg
gaggtgatcaaagccctcagaaacggcggggcccacctggacttccgagccaaagatggc
atgacagcgctgcacaaagccgcccgagccaggaacctgatggctctgaagaccctcctg
gagctgggagcgtctccggattacaaggacagttacggcctgacgccgctgtatcacacg
gctgtcgtcgggggcgacccctgctgctgtgagctgctgctccacgagcacgcggccgtg
agctgcaaggatgagaacggctggcacgagatccaccaggcctgcaggtacggtcacgtg
cagcacctggagcacctgctcttctacggggccgacatgggggcccagaacgcctcgggg
aacaccgccctgcacatctgcgccctctacaaccaggacagctgtgcccgggtgctgctc
ttccggggtggaaataaggaactgaagaactacaacagccagaccccgtttcaggtggcg
atcatcgccggcaacttcgagctggccgagtacatcaagaaccacaaggagaccgacacc
gtgcccttccgagaggccccggcgtactccaaccgcagacggcggccccccagcacgctg
gccgccccccgggtcctgctgcgttccaacagcgacaacaacctcaacgccagcgcgccc
gactgggccgtctgctccgccgccacctcccaccgcagcctctcgccacagctgctgcag
caggggcccagcaagcccgatggggtccccaagaccgtcgggagctacatccccgggccc
cgcagccggtccccttcgctcaacaggctgggcggtgccgccggcgaggacggcaagagg
ccccagcagccctggctcatcgggcccactttcccgccaggtgccaacaaggacacgctg
tctgccttcgagtacccggggcccaggcggaagctgtacagcgccgtgcccgggaggctc
ttcgtcgtcgtcaagccataccaaccccaggtcgacggcgagatcccccttcaccgtggt
gacagggtcaaagttctgagcatcggcgaggggggcttctgggaaggcagcgcccgcggc
cacatcgggtggttcccggccgagtgcgtggaggaagtccagtgcaagcccaaggacagc
caggcagaaacgcgtgtggaccgcagcaagaagctcttccggcactacacggtcggctcg
tacgacagcttcgaggcttccagtgactgcattatcgaggagaagactgtggttctgcag
aagaaagacaatgagggctttggatttgtgctccgaggggcgaaagcggatacgcccatc
gaagaattcacgccaacgccggcgttcccggccttgcagtacctggagtctgtggatgaa
ggcggggtggcctggcaagccggactaaggactggggacttcttgatcgaggtcaacagt
gagaacgtggtcaaggtcggccaccggcaggtggtgaacatgatccgccagggcgggaat
cacctggtcctcaaggtggtgacggtcaccaggagcctcgacccggacgacacagccagg
aagaaagctcccccccctccgaagcgggctccaaccacagccctcaccctgcgctccaag
tccatgacctcagagctggaggagctcgtggataaagcctccgtccggaagaagaaggac
aaacccgacgagatcgtccccgcccccaagccgtcccgagctgccgaggccgtggtggcg
gagaccagggtggccaccatcaagcagcggcccaccagccggtgcttcccgtccgtctcc
gacatgaactctgtgttcgagcgccaggggatcgccgtgatgacgcccactgttcccggg
agcccgaaaggcccgtttctgggcctccctcgaggtacgatgcgaaggcaaaaatcaata
gacagcagaatctttctatcaggaataacggaggaagagcgacagtttctggcccccccg
atgctgaagttcaccaggagcctgtccatgccggacacctcggaggacatcccgccccct
ccgcaggcggtgcccccgtctccgcccccgccctcccccaccgcctacaactgccccaag
tccccgactccgcgagtctacgggaccatcaagcccgcgttcaaccagaacgccgccgcc
aaggtgtcccccgcgcctcgctcggacacggtggccaccatggtgagggagaaggggctg
tactaccgcagggagctggaccgctactccctggactccgaggacctctacagccgcgcc
gccgccgccgccgcccagggcaccttccgcggcaagaggggccagatgcccgaaaacccc
tactccgaggtgggcaagatcgccagcaaggccgtgtacgtgcccgccaagcccgccagg
cgcaagggcatgctggtgaagcagtccaacgtggaggacagccccgagaagacgtgcgcc
atcgccatccccaccatcatcgtcaaggagccctccaccagcagcagcggcaagagcagc
caggccagcagcatggagatcgacccccaggcctcggagcagccgggccagctgcggccc
gacgacagcctgaccgtcagcagccccttcgccgccgccatcgccggggccgtccgcgac
cgggagaagcggctggaagccaggaggaactcgccggccttcctgtccacagacctgggt
gacgaggacgtgggcctggggccgcccngcccccgggcgcggccctccaccttccccgag
gaggccgagttcggcgaggaggacggcgctgagccgctcgcgtcccccacgccagcggcg
gcgcccagggaggccgagaaccactttgcgggcggtggcgaggccggggctcagggtgag
gccagcaggcccctgaaccccacatccaaagccaaggggcccgagggcagccctgcggtg
ccccccaagagcagcagcacggccgggcccgagaactacgtgcacccgctcacagggagg
ctgctggaccccagctccccgctggccctggcgctctccgcgagggacagagccatgaag
gagtcccagcagggccccaggggggaggcccccaaggccgacctcaacaagcctctctac
atcgataccaaaatgcggccctgcacggaagcaggcttccctccggtcaccaggcagaac
acgcgggggcccctgaggcggcaggagacggagaacaagtacgagaccgaccggaaggac
gacaagaagggcacgctcatcagcatcgtggacgcgtcccagcagaagtcggccgggctg
ctgatggtccacactgtggacgcggccaggccggacgacttcctggaggaagaggacgag
aaggctgacgaggaaacagagccagaccacttgccgtccgaggtgccggaaggcgtcccc
gaaaccgaaggtgctttaccgatgcccgccggccccgagcccgcggccaccgcgcccagc
aggaccgtcacggcggcgggctccgtggaggaggcggccatcctgccgttccggatccct
cccccgcccctggcgtccgtggacctggacgaggattttatcttcacggagccgctgcct
ccccccctggaatttgcaaatagttttgagatccccgatgaccgcgccgctcctgtcccc
gtccccacagacctggccaagcaggagaagaacgacgcctcccagtccccttcgttaccc
tccagccagccagccaactccgcagacgccaagaagccagctggcctctcgaactgtctg
cccgcctcgttcctgccgccgcccgagagctttgacgccgtcacggactccgggatcgag
gaggtggacagccggagcagcagcgaccaccacctcgagacgaccagcaccatctccacg
gtgtccagcatctccaccctgtcctcggagggcggggagaacgcggacacctgcacggtc
tatgcagacgggcaggcttttatggtcgacaagcccccggtacctccgaagccaaaaatg
aagcccatagtccacaaaggcaacgcccttttccaggacgcgctgctggaggaggacgtg
ggcagctttgtgatccccccgcccgcgcccccgccgccgccaggcgctgtccagcctggg
acaaccaaggtcatccagccaaggacctccaagctgtggggggacgtctcagagatcaaa
agccccattctctcaggcccaaaggcgaacgtgattagcgagttgaactcaatcctgcag
caaatgaaccgagagaagtcagcgaagccgggggcaggcctggacctgccgacgggaacc
aagcctgccagcctcgctccgagaggcccagaggtcatgagcagcgtctcaggttcgcgg
agcacgaccgtcaccttcaccgtccgccctgggacctcccagcccatcaccctgcagagc
cggcccccagactatgagagcaggacctcaggaacgagacgcgcccccagccctgtggtc
tcgccaacagagctgagcaaagagatgctgcccgcccctctgtccgcggccgctgcctcg
ccctctcccgcgctctcggacgtcttcggcctccccagccagccccccgccggggacctg
tttggcttgaacccagcgggacgcagcaggtcgccgtccccctcgatactgcaacagcca
atctccaataagcctttcacagctaagcccgtccacctgtggaccaagccagacgtggcg
gactggctggaaagcctcaacctgggtgagcataaagaggccttcatggacaacgagatc
gacggcagccacctgcccaacctccagaaggaagacctcatagacctgggagtgacgcgg
gtcgggcacaggatgaacatagagagggctctgaagcagctgctggacagataa
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