Sus scrofa (pig): 102160515
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Entry
102160515 CDS
T01009
Symbol
CAMTA1
Name
(RefSeq) calmodulin-binding transcription activator 1 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
102160515 (CAMTA1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Other transcription factors
Others
102160515 (CAMTA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
IQ
Ank_4
IQ_SCN5A_C
Ank_5
AGRB_N
Motif
Other DBs
NCBI-GeneID:
102160515
NCBI-ProteinID:
XP_020953157
LinkDB
All DBs
Position
6:67605863..68471922
Genome browser
AA seq
1806 aa
AA seq
DB search
MEGEQRNVPLPGLAGRALQARHPCPFPLLAGAGEPSDLGRLLPRMEGDLGPEPLLGGELP
TDLLFWTLHEQESVSQSVFCGASTYCVLNTVPPLEDDHGNSNSSHVKIFLPKKLLECLPK
CSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYC
WKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVP
AIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQL
VQQILDSHQTKPQPRTHNCLCTGSLGAGSSVHHKCNSAKHRIISPKVEPRTGGYGGHAEV
QHNDVSEGKHEHGHGKGSGREKRNGKVAKPVLLHQSSTEVSSTNQVEVPDTTQSSPVSIS
SGLNSDPDVVDSPVVTGVSGMAVASVMGSLSQSATVFMSEVPSEAVYTMSPTAGPNHHLL
SPDASQGLVLAVSSDGHKFAFPTTGSSDSLSMLPTHVSEELVLSPTLDGGGRKMPETTMN
FDPDCFLNNPKQGQTYGGGGLKAEMVGPNVRHSPPVERGFSFTTVLTKEIKTEDTSFEQQ
MAKDAYSSAAAAAAAAAAASSSLTLTAGSSLLPSGGGLSPSTTLEQMDFSAIDSNKDFTS
SFSQTGHSPHVHQTPSPSFFLQDASKPLPLDQAAHSSLSDAGGTFVLPTVKTEASSQTSS
CSGHVETRMESTSSLHLMQFQANFQAMAAEGEVTMETSQGAEGGEGLIKSGELQACSSEH
YLQPEPTGVIRSAGGVPILPGSVVQGLYPVAQPGLGSASNMELSLDHFDISFGSQFSDLI
NDFVSVEGGGSTLYGHQLVSGDGAALSQSEDGARAPFSQAEMSIPCCSPQQGSLQLGSAE
GGAGTMAYMHVAEVVSAASASGALGMLQQSGRVFMVTDYSPEWSYPEGGVKVLITGPWQE
ASNNYSCLFDQLSVSASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARAL
PTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGGSGGGGGGSAGGTGG
GTGGSQAQCTSGPGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAA
QGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHLEAAVVLYKWDR
RAISIPDSLGRLPLGIARSRGHVKLAECLEHLQRDEQAQLGQNPRIHCAPSEEPGTESWM
TQWPSDAITSPEIPKGVTVIASTNPELRRPRSEPSNYYSSESHKDYPAPKKHKLNPESFQ
ARQEKLLSTALSLEQPNIRKQSPSSKQSVPETFRPREGLRGCSREGSPPTPETAGFQASG
SQPVVKWNSKGLYIGVSTVQVTGTPKGTSVGKEAAPSQVRPREPMSVLMMANREAVHTEL
GPYRDSAESEDCPQPMDDIQVNMMTLAEHIIEATPERIKQENFVPLESPALERTDAATIS
STMSWLAGYLADVDHLPSAAQIRSAYNEPLTPSSNTSLSPVGSPVSEIAFEKPSLPSAAD
WSEFLSASTSEKVENEFAQLTLSDHEQRELYEAARLVQTAFRKYKGRPLREQQEVAAAVI
QRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAVLIQKYYRSY
KKCGKRRQARRTAVIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSPLVDHRLYKRGMNI
FGTQWCVLTCSQHALCHSYRASLSFLFCNPNEIAGNWQDLSLPTFPHELLRLSEQQSERI
EKGQGT
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggagggagagcagagaaatgtgccacttccaggcctggctggtagagccctccaggca
cggcatccgtgccctttccctctgctggctggtgcaggagagcccagtgacctggggcgg
ctcctccctaggatggaaggagatctggggccagagccgctgctcggaggagagctgcct
actgatctactgttttggactttacacgagcaagaaagcgtttcccaaagtgtattctgc
ggagctagcacctactgtgttctcaacaccgtgccgcctctagaagatgatcatgggaac
agcaatagtagtcatgtaaaaatctttttaccgaaaaagctgcttgaatgtctgccgaaa
tgttcaagtttacccaaagagaggcaccgctggaacactaatgaggaaatcgcagcttac
ttaataacatttgagaaacacgaagaatggctaaccacctcccctaagacaaggccgcag
aatggctcaatgatactctacaacaggaagaaagtgaaatacaggaaagatgggtattgc
tggaaaaagaggaaagacgggaagacgacccgagaggaccacatgaaactgaaggtccag
ggagtcgagtgcttgtacggctgctatgtccattcctccatcatccccaccttccaccgg
aggtgctactggctccttcagaaccccgacattgtcctggtgcactacctgaatgtcccg
gccatcgaggactgcggcaagccctgcggccccatcctctgctccatcaacaccgacaag
aaggagtgggccaaatggacgaaagaggagctcattgggcagctgaagcccatgttccac
ggcatcaagtggacgtgcagcaacgggaacagcagctcgggcttctcagtggaacagctg
gtgcagcagatcctcgacagccaccagaccaagccacagcctcggacccacaactgcctc
tgtaccggcagcctgggcgcgggcagcagcgtgcaccacaagtgtaacagtgccaaacac
cgcatcatctcgccgaaggtggagccgcggaccggggggtacgggggccacgcggaggtg
cagcacaacgacgtgtccgagggcaagcacgagcacggccacggcaagggctccggccgc
gaaaagaggaacggcaaggtggccaagcccgtgctgctgcaccagagcagtaccgaggtc
tcgtccaccaaccaggtggaggtcccggacaccactcagagctcgcccgtgtccatcagc
agcggactcaacagcgacccggacgtggtggacagccccgtggtcacaggcgtgtccggc
atggcggtggcctccgtgatggggagcttgtcccagagcgccacggtcttcatgtccgag
gtccccagcgaggccgtgtacaccatgtcccccaccgccggccccaaccaccacctcctc
tcgcccgacgcctctcagggcctcgtcctggccgtgagctccgacggccacaagttcgcc
ttccccaccacgggcagctcggacagcctgtccatgctgcccacccacgtgtccgaagag
ctggtcctctcccccaccctcgacggggggggccggaagatgccagaaaccaccatgaac
tttgaccccgactgtttcctcaataacccaaagcagggccagacgtacgggggcggaggc
ctgaaagccgagatggtcgggcccaacgtccggcactcgccccccgtggagaggggcttc
agcttcaccaccgtcctcaccaaggagatcaagacggaggacacctcgttcgagcagcag
atggccaaagacgcgtactcctccgcggcggcggcagcggcggcggcggcggcggcgtcc
agctccctgaccctgaccgcgggctccagcctcctgccgtcgggcggcggcctgagcccc
agcaccaccctggagcagatggacttcagcgcgatagactccaacaaggacttcacgtcc
agcttcagccagacgggccacagcccccacgtccaccagacgccctccccgagcttcttc
ctgcaggatgccagcaagcccctccccctcgatcaggccgcccacagcagcctgagcgac
gccgggggcaccttcgtgctgcccacggtgaaaacggaggcctcgtcgcaaaccagctcc
tgcagcggccacgtggagacgcggatggagtccacctcgtccctccacctcatgcagttc
caggccaacttccaggccatggcggccgaaggggaggtcaccatggagacctcgcagggg
gccgaagggggggagggcctgatcaagtctggggagctgcaggcctgcagctccgagcac
tacctgcagccggagcccactggggtgatccgcagcgcgggcggcgtccccatcctgccg
ggcagcgtggtgcaggggctctaccccgtggcccagccgggcctcggcagcgcctccaac
atggagctcagcctggaccacttcgacatctcctttggcagccagttctccgacctgatc
aacgacttcgtctccgtggaggggggcggcagcaccctctacgggcaccagctggtgtcg
ggggacggcgcagcgctctcgcagtcggaggacggggcccgcgcccccttcagccaggca
gagatgagtatcccctgctgcagcccccagcaggggagcctgcagctgggcagtgctgag
ggcggggccggcaccatggcctacatgcacgtcgccgaggtggtctcggctgcctcggcc
tcgggcgccctggggatgctgcagcagagcggacgcgtgttcatggtgaccgactactcc
ccagagtggtcctacccggagggaggagtgaaagttctcatcacaggcccgtggcaagaa
gccagcaataactacagctgcctgttcgaccagctctcagtgtctgcgtctctgatccag
cccggtgtgctgcgctgctactgcccagcccatgacactggtctcgtgaccctacaagtt
gccttcaacaaccagatcatctccaactcagtggtctttgagtacaaagcccgggccctg
cccacgctcccgtcctcccagcatgactggctgtccctggacgataaccagttcaggatg
tccatcctggagcggctggagcagatggagaggaggatggccgagatgacggggtcgcag
cagcacaagcaggggggcagcggtggcggcggcggcggcagcgcggggggcactggcggc
ggcaccggaggaagccaagctcagtgcacgtcgggccctgggacgctggggagctgcttt
gagagccgcgtggtcgtggtgtgtgagaagatgatgagccgggcctgctgggccaagtcc
aagcacttgatccactccaagaccttccgtggaatgaccctcctccacctggccgcggcc
cagggctacgccaccctcatccagaccctcatcaagtggcgcacaaagcatgcagacagc
atcgatttggagctggaggtcgaccccttgaatgtggaccacttctcctgtactcctctg
atgtgggcctgtgctctagggcacctagaagcagctgtcgtgctgtacaagtgggaccgc
cgggccatctccattcctgactctctaggaaggctgcctttgggaattgccaggtcaagg
ggtcacgtgaaattagccgagtgtctggagcacctgcagagggacgagcaggctcagctt
ggacagaaccccagaatccactgtgctccaagtgaagagcccggtacggagagctggatg
acccagtggcccagtgacgccatcacctccccagaaatacccaaaggagtcaccgtcatt
gcaagtaccaatccagagctgagaagacctcggtctgaaccctctaattactacagcagt
gagagccacaaagattatccagctcccaaaaagcataaattgaaccccgagtccttccag
gcgaggcaggagaagctgctttccactgcactgagtctggaacagccaaatatcaggaag
cagagccctagttctaagcagtctgtccctgagactttccgccccagggaagggctgagg
ggctgcagccgggaaggctcccctcccactccagagactgcaggattccaagcctctgga
tctcagcccgtagtaaagtggaattccaaaggtctttacattggtgtgtctacagtacag
gtgactggaactccgaaggggaccagtgtagggaaggaggcagcaccttcgcaggtgcgt
ccgcgggagccaatgagtgtcctgatgatggctaacagagaggcggtgcacacagagctg
gggccctaccgcgatagcgcagagagcgaggactgcccacagcccatggatgacatacag
gtgaacatgatgaccttggcagaacacatcattgaagccacacctgagcggatcaagcag
gagaattttgtgcccctggagtccccagccctggaaaggacagacgctgccaccatcagc
agtaccatgagctggctggccggttacctagccgatgtcgaccacctgccaagtgctgcc
cagatcagaagtgcatataacgagcctctcaccccttcttctaataccagcctgagcccc
gtcggctcaccagtcagtgagatagctttcgagaaacccagcctcccctctgcagcggac
tggtctgaattcctgagtgcatctaccagtgagaaggtggagaacgaattcgctcagctg
accctgtccgatcacgaacagagagagctctacgaggctgccaggcttgtccagacggct
ttccggaaatacaagggccgacccttgcgggagcaacaggaggtggcagcagctgtcatc
cagcgctgttacagaaaatacaaacagctgacatggatagccttgaagtatgcactttat
aaaaagatgacccaggctgccatccttatccagagcaaattccgaagttactacgaacaa
aaaaaattccagcagagccggcgtgccgctgtgctgatccaaaagtattaccggagttat
aaaaagtgtggcaagagacggcaggctcgccgaacagcggtcattgtacagcagaagctc
aggagcagtttgctaaccaaaaagcaggaccaggctgctcgaaaaataatgaggtttctc
cgccgctgtcgccacagccccctggtggaccataggctgtacaaaaggggaatgaatatt
tttggaacacagtggtgtgtgttaacttgcagccaacatgctctgtgtcattcttatcgg
gcctctctgtcttttttgttttgcaacccaaatgagattgctggaaactggcaagacctc
tctttgcccacattcccccacgagctgttgcggctctcagagcaacagagtgaaagaatt
gaaaaaggccaaggaacttga
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integrated database retrieval system
