KEGG   Sus scrofa (pig): 102163404
Entry
102163404         CDS       T01009                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssc01009]
    102163404 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    102163404 (KDM5B)
Enzymes [BR:ssc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     102163404 (KDM5B)
Protein phosphatases and associated proteins [BR:ssc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102163404 (KDM5B)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102163404 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_UBR7-like PHD_2 PHD_Pygo zf-PHD-like NspV
Other DBs
NCBI-GeneID: 102163404
NCBI-ProteinID: XP_020920226
Ensembl: ENSSSCG00000010928 ENSSSCG00000022827
UniProt: A0ACM8QMX8 F1S4N3
LinkDB
Position
10:complement(24739115..24831537)
AA seq 1547 aa
MEAPGPRPAPALGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVR
PPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVER
KILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLF
LSGDSLRCLQKPNLNTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMNIKIEP
EETAEARTHNLRRRMGCPAPKCENEKDLKSSIKQEALEKKEYVIESEKEKPKSRAKKTTN
AVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQ
EAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEY
GADIASKEFGSGFPVRDGKVKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLP
WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGFAAEQLEAVMKRLAPELFVSQ
PDLLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTV
DWLPLGRQCVEHYRLLHRYCVFSHDEMICRMASKADVLDVVVASTVQKDMAIMIEDEKAL
RETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSC
PPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFKALIEE
SEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSHNQLTVNELRQF
VTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEFDVELP
QLAEMRTRLEQAHWLEEVQQACLDPSSLSLDDMRRLIDLGVGLAPYSAVEKAMARLQELL
TVSEHWDDKARSLLKARPRHSLNSLATVVKEMEEIPAYLPSGAALKDSVQRARDWLQDVE
ALQVGGRVPVLDTLIELVTRGRSIPVHLSSLPRLESLVAEVHVWKECAANTFLTENSSFS
LLEVLCPRCDVGLLGLKRKQRKLKEPLPSGRKKSPRVESLSDLERALMESRETASAMATL
GEARLREMEALQSLRLANEGKLLSPVQDVDMKVCLCQKAPAAPMIQCELCRDAFHTSCVA
VPSISQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHR
ARQLLSSGNLKPVQDRVGSGLLCGRWQATAVQVPDTSKASQPPGTMSFSLPDDWDSRTSY
LHSPFSTGRSCIPLHGISPEVNELLMEAQLLQVSLPEIQELYQTLLAKPSPTQQAGRSSP
IRTSSEKSDGCRGKRDSIGGLERKLKRRLEREGLSSERWDRVTKMRTPKKKKLKLSHPKD
TNNFQLERERSCELAHPADMHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEVDWVQC
DGSCNRWFHQVCVGVSPETAEKEDYMCARCAATDAPGRRENKQTHLL
NT seq 4644 nt   +upstreamnt  +downstreamnt
atggaggcccccggcccgcgccctgcgccggccctcggtggccccggcccgctgggcgag
ttcctgccgccgcctgagtgcccggtcttcgagcccagctgggaggagttcgccgacccc
ttcgccttcatccacaagatccggcccatagccgagcagaccgggatctgcaaggtgcgg
ccgccgccggattggcaaccaccatttgcatgtgatgttgacaaactgcattttacccca
cgtatccagagactgaatgaattggaggctcaaactcgtgtaaaattaaatttcttggat
cagattgcaaaatactgggaattacagggaagtactctgaaaattccacacgtggagagg
aagattttggacttgtttcagcttaataagttagttgcagaggaaggtggatttgcagtt
gtttgcaaggatagaaaatggaccaaaattgccaccaagatggggtttgctcctggcaaa
gctgtgggctcccatatcagagggcattatgagcgaattctcaacccctacaatttattc
ttgtctggagacagtttgaggtgtctacagaagccaaacctgaacacagacacaaaggac
aaggagtacaaaccccatgatattccccagaggcagtctgtgcagccctcggaaacatgt
cccccagcccggcgagcaaaacgcatgagggcagaggccatgaatattaaaatagaacca
gaagaaacagcagaagccagaactcataacctgagacgtcgaatggggtgtccagctcca
aagtgtgaaaatgagaaagacctgaaaagcagcatcaagcaagaagcccttgagaagaaa
gagtatgttatagaaagtgagaaggaaaaacccaagagtcgagctaaaaaaaccaccaat
gccgtggacctgtacgtctgtctgttgtgtggcagtggcagcgatgaggaccggcttctc
ttgtgtgatgggtgtgatgacagttaccataccttctgcctgatcccacctctccatgat
gttcctaagggagactggaggtgtcctaaatgtttggctcaggagtgcagtaagccacaa
gaagcatttggctttgaacaggcagccagggactataccctgcgtacttttggggaaatg
gcagatgcattcaaatctgattacttcaacatgccagtccatatggttcccacagaactg
gttgagaaagaattttggcgactggtgagcactattgaagaggatgtcactgtggaatat
ggagctgatattgcctccaaggaatttggcagtggcttccctgtccgagatgggaaagtc
aagctctcccccgaggaggaggaatatcttgatagtggctggaatttgaacaacatgcca
gtgatggagcagtctgtccttgctcatatcactgctgatatatgcggcatgaagcttcct
tggttgtatgtgggaatgtgcttttcttcattctgttggcatattgaagaccactggagc
tattccattaactacttacactggggtgagccgaagacatggtacggagtaccagggttt
gctgccgagcagctggaggccgtgatgaagaggctggccccagagctcttcgtctcccag
cctgacctcttgcatcagcttgtcaccatcatgaaccccaacaccctgatgactcaccaa
gtgcctgtttaccgaactaatcagtgtgctggggagtttgtgattacgtttccaagagcc
taccacagcggtttcaatcaaggttttaattttgctgaggctgttaacttctgcactgtt
gattggttgcccttaggccgacaatgcgtggaacattaccgcctactgcatcgctattgt
gtcttctcccacgatgagatgatttgcaggatggcttccaaggcggacgtactagacgtt
gtcgtggcatcaaccgttcagaaagatatggccatcatgattgaggatgagaaggctcta
agagaaactgtccggaaattgggagtaattgattcagaaagaatggactttgagctgttg
ccagatgacgagcgtcagtgtgtaaaatgcaaaactacttgcttcatgtctgccatctcc
tgttcttgtaaacctggcctgcttgtttgcctgcatcatgtaaaagaattatgttcctgt
cctccttataaatataaactgcggtatagatacactctagatgacctctatcccatgatg
aatgcattgaagcttcgagctgaatcttacaatgaatgggccttgaatgtgaatgaagct
ttggaggcaaagatcaataaaaagaaaagccttgtcagctttaaggctttgattgaagaa
tctgagatgaagaaattcccagacaacgatcttttacgtcacctccgcttagtcacacag
gatgctgagaagtgtgcctctgtcgcacagcagctgcttaacggcaaaaggcagacgaga
taccgatctgggggagggaaatcccacaaccagctgacggtgaatgagctccggcagttt
gtgacacagctgtatgctcttccctgtgttcttagccagactccactgctgaaggatctc
ttgaatcgtgtagaagatttccaacagcatagccagaaattactctctgaggagatgccc
agtgctgctgagctgcaagatttgctagatgtcagctttgagtttgatgttgagcttcca
caacttgctgagatgcgtacccgtctggagcaggcccattggctggaagaggtgcagcaa
gcttgcttagaccccagctccctctccttggatgatatgagacgtctcatagacttgggg
gtgggtctggccccatattcagctgtggagaaagcaatggctcggcttcaggaactgctc
actgtgtcagagcactgggatgacaaagccaggagcctcctcaaggccaggcctcggcat
tcgttgaacagccttgcaacagtggtgaaagagatggaggagatccccgcgtacctgccc
agcggtgcagctctgaaggactctgtgcagagagccagagactggcttcaggacgtagag
gccctgcaggttggcggacgtgtgccagttttggacacactgatagagcttgttacgcga
ggccgatccatccctgtgcatctgagttctttaccgaggctggagtcactagtagctgag
gttcatgtttggaaagaatgtgctgctaacacattcttgactgagaattcatccttttct
ctcttagaggtgctgtgtcctcgatgtgatgttggccttttggggttgaagaggaagcag
agaaagttaaaggagcccttgccaagtggcaggaagaaaagccctagagtagagagtctg
agtgacttggagagagctctgatggaaagcagagagactgcttccgctatggcaaccctc
ggggaagctcgcttacgggaaatggaggccttgcagtctctcagactagccaatgaaggg
aagctgctgtcacctgtccaggatgtggacatgaaggtctgcctgtgtcagaaggccccg
gctgcccccatgatccagtgtgaactctgcagggatgctttccacactagctgtgtggca
gtgcccagcatttcgcagggcccccgaatctggctttgtccccactgtcggaggtcagag
aaacccccgctagagaaaattctgcccctgctggcctctctccagcgcattcgagttcgg
cttcctgagggcgatgcacttcggtatatgattgaaagaaccgtgaactggcagcacaga
gctcggcagctgctttcgtcagggaacctcaagcctgtgcaggaccgcgtgggctcagga
ctattatgtggcaggtggcaggctacagcggtacaggtgccagatacaagcaaggcatca
cagcctcctggcaccatgtccttttccttgcctgatgactgggacagtaggacctcgtat
ttacactctcccttctctactggacggagctgcatcccccttcacggcatcagtccagaa
gtgaacgagctgttgatggaagcccagctgctccaggtgtcccttcctgaaattcaggaa
ctctaccagacgctgctggcaaagccaagtcccacgcagcaagctggccgaagctctccc
atcagaaccagcagtgagaagagtgatggctgccgcgggaagcgggacagcatcggcggt
ctggagaggaaactgaagagacgcctggaaagagaaggcctctccagtgagcggtgggat
cgagtcacaaaaatgcggacccctaaaaagaagaagctgaaactgagccaccccaaggat
acgaacaatttccagttagagagagagcgtagctgtgagttagcccatcctgccgacatg
cactccctaccctcagacacgtcctactcggagcaggaggactctgaggacgaggacgcc
atctgcccggccgtcagctgcctgcagccggaaggagacgaggtggactgggtccagtgt
gatggcagctgcaatcggtggttccatcaggtctgtgttggtgtctctcccgagacggcc
gagaaggaggactacatgtgtgcgcgctgcgctgcgacggacgcgccgggccggagagaa
aacaaacagacccacttactgtaa

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