KEGG   Sus scrofa (pig): 102164336
Entry
102164336         CDS       T01009                                 
Symbol
CACNA1B
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent N-type calcium channel subunit alpha-1B
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04010  MAPK signaling pathway
ssc04020  Calcium signaling pathway
ssc04721  Synaptic vesicle cycle
ssc04723  Retrograde endocannabinoid signaling
ssc04725  Cholinergic synapse
ssc04726  Serotonergic synapse
ssc04727  GABAergic synapse
ssc04728  Dopaminergic synapse
ssc04930  Type II diabetes mellitus
ssc05016  Huntington disease
ssc05020  Prion disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05032  Morphine addiction
ssc05033  Nicotine addiction
ssc05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102164336 (CACNA1B)
   04020 Calcium signaling pathway
    102164336 (CACNA1B)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    102164336 (CACNA1B)
   04725 Cholinergic synapse
    102164336 (CACNA1B)
   04728 Dopaminergic synapse
    102164336 (CACNA1B)
   04726 Serotonergic synapse
    102164336 (CACNA1B)
   04723 Retrograde endocannabinoid signaling
    102164336 (CACNA1B)
   04721 Synaptic vesicle cycle
    102164336 (CACNA1B)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    102164336 (CACNA1B)
  09164 Neurodegenerative disease
   05016 Huntington disease
    102164336 (CACNA1B)
   05020 Prion disease
    102164336 (CACNA1B)
   05022 Pathways of neurodegeneration - multiple diseases
    102164336 (CACNA1B)
  09165 Substance dependence
   05032 Morphine addiction
    102164336 (CACNA1B)
   05033 Nicotine addiction
    102164336 (CACNA1B)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    102164336 (CACNA1B)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssc04040]
    102164336 (CACNA1B)
Ion channels [BR:ssc04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   102164336 (CACNA1B)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel Phage_TAC_15
Other DBs
NCBI-GeneID: 102164336
NCBI-ProteinID: XP_020936695
LinkDB
Position
Unknown
AA seq 2329 aa
MVRFGDELGGRYGGAGGGERARGGGASGAGGPGPGGLQPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVLHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNAWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAA
AKRSRSDLIHAEEGEDRFADLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRLVK
AQSFYWAVLCVVALNTLCVAMVHYHQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRS
YFRSSFNCFDFGVVVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWSSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLRLQNL
RASCEALYSEMDPEERLRFATSRHLRPDMKTHLDRPLVVEPGRDGARGPAGGKARPEGTE
AAEGADPPRRHHRHRDKDKAPAPAPAGEQDRAEGGEPGAREERPRPHRSRSKEAAGPREA
RSERARGPGPDGGRRHHRRGSPEEVAEREPRRHRAHRHAPEPGKEGAAPGTKGERRARHR
GGARAGPREAESGEEPARRHRGRHKAPPAHEEAEKEGEAEDRDQEKELRNHQPQEPHCDL
EASGVMGVGPVHALPSTCLEKVEEQPEDADNQRNVSRMGSQPLDLSTTVHIPVTLTGPPG
ETTVVPSGNVDLESQAEGKKEVEADDVMRSGPRPIVPYSSMFCLSPTNLLRRFCHYIVTM
RYFEVVILVVIALSSIALAAEDPVQTDSPRNNVLKYMDYIFTGVFTFEMVIKMIDLGLLL
HPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKTIKRLPKLK
AVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDCRGQYLDY
EKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYR
MELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPL
TRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELMLKCLNVV
FTSMFSMECMLKIVAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETNNFINLSFLRL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDD
TSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSSRACDELANATECGSDFAYFYFV
SFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDM
FEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAP
AGTKQHQCDAELRXEISCVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKT
TRDQIHQAPGGLSQMGPVSLFHPLKATLEQTQPQPAVLRGARVFLRQKSSASLSNGGAVQ
TQESGIKESVSWGTQRTQEGPREVRPPLERGHSTEIPVVQTGKPAVDVQMQSMALRGPDG
EPQPGLESQGRAASMPRLAAETQPAPDASPMKRSISTLAPQRPHVAHLCNATLDRAPASQ
AAPHHHHRCHRRRDRKQRSLEKGPGLSADTDGAPNSTAGPGPPPVDGPAGCRRERRQERG
RSQERRQPSSSSSEKQRFYSCDRFGGREPPQPKPSLSSHPTSPTAGQEPGPLRQGSGSVN
GSPLLSTSGASTPGRSGRRQLPQTPLTPRPSITYKTANSSPVHFAGAQTSLPAFSPGRLS
RGLSEHNALLQRDPLSQPLAPSSRIGSDPYLGQRLDNETARAQPEDMLTFEEAVATNSGR
SSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSSGSRVRHSYHHPDQDHWC
NT seq 6990 nt   +upstreamnt  +downstreamnt
atggtccgcttcggggacgagctgggcggccgctatgggggcgccggcggcggcgagcgg
gcccggggcggcggggccagcggggcgggcggccccggcccggggggtctgcagccgggc
cagagggtcctctacaagcagtcgatcgcgcagcgcgcgcggaccatggcgctctacaac
cccatcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgccaagcgcatcaccgagtggcctccgtttgagtacatg
attctggccaccatcatcgccaactgtatcgtgctggccctggagcagcacctccctgat
ggagacaagacgcccatgtccgagcggctggacgacacggagccctatttcatcggcatt
ttctgcttcgaggccgggatcaagatcatcgcgctgggcttcgtcctgcacaagggttcc
tacctgcggaacggctggaatgtcatggactttgtggtggtcctcacagggatccttgcc
acagctggcactgactttgacctgcggaccctgcgggccgtgcgggtgctgaggcccctt
aagctggtgtctgggattccaagtttgcaggtggtgctcaagtccatcatgaaggccatg
gttccgctcctgcagatcgggctgctgctcttctttgccatcctcatgttcgccatcatt
ggcctcgagttctacatgggcaaattccacaaggcctgtttccccaacagcacagatgca
gagccagtgggcgacttcccctgtggcaaggaggcccccgcccggctgtgcgagggcgac
acagagtgccgggagtactggccgggacccaacttcggcatcaccaactttgacaatatc
ctgtttgccatcctgacggtgttccagtgcatcaccatggagggctggaccgacatcctc
tacaacaccaacgacgcggctggcaatgcctggaactggctgtacttcatccctctcatc
atcatcggctccttcttcatgctcaacctggtgctgggcgtgctctccggagagtttgcc
aaggagcgtgagcgggtggagaaccgccgggccttcctgaagctccgccggcagcagcag
attgagcgggagctcaacgggtacctggaatggatcttcaaggctgaggaagtcatgctg
gccgaggaggacaagaatgctgaggagaagtcccctctggatgtgttgaagagggcggct
gccaagaggagccgaagcgacctgatccacgcagaggagggagaggaccgctttgcagac
ctctgtgccgtggggtcccccttcgcccgagccagcctcaagagcgggaagacggagagc
tcgtcctacttccgcaggaaggagaagatgttccgcttcttcatccggcgcctggtgaag
gcgcagagcttctactgggcggtgctgtgcgtggtggccctgaacacgctatgcgtggcc
atggtgcactaccaccagccgcagcgcctcaccaccgcgctgtactttgcagagtttgtt
ttcctgggtctcttcctcacagagatgtccctcaagatgtacggcctggggcccaggagc
tacttccggtcctccttcaactgcttcgattttggggtcgtcgtggggagcatcttcgag
gtggtctgggcggccatcaagccggggacctccttcgggatcagcgtgctgcgggccctc
cggctgctgaggatcttcaaagtcaccaagtactggagctccctgcgcaacctggtggtg
tccctgctgaactccatgaagtccatcatcagcctgctgttcctgctcttcctcttcatc
gtggtcttcgctctgctgggcatgcagctcttcgggggacagttcaacttccaagacgag
actccaacgaccaactttgacaccttccctgctgccatcctcactgtcttccagatcctg
accggggaggactggaacgcggtgatgtaccacgggatcgagtcgcagggtggagtcagc
aaaggcatgttctcgtccttttatttcatcgtcctgacgctgtttggaaactacaccctg
ctgaacgtcttcctggccattgccgtggacaacctcgccaacgcacaggagctgaccaag
gacgaagaggagatggaagaagcagccaatcagaagcttgctctgcaaaaggccaaagaa
gtggctgaagtcagccccatgtctgccgcgaacatctccattgctgccaggcagcagaac
tcggccaaggcgcgctcggtgtgggagcagcgggccagccagctgcggctgcagaacctg
cgcgccagctgcgaggcgctctacagcgagatggaccccgaggagcggctgcgcttcgcc
acctcccgccacctgcggcccgacatgaagacgcacctggaccggccgctcgtggtggag
ccgggccgggacggcgcgcgggggcccgcggggggcaaggcccggcccgagggcacggag
gccgccgagggcgcggacccgccgcgcaggcaccaccggcaccgtgacaaggacaaggcc
ccggctccggccccggccggggagcaggaccgggcggaaggcggggagcccggggcccgg
gaggagcggccgcggccgcaccgcagccgcagcaaggaggccgcgggcccccgggaggcc
cggagcgagcgcgcccgcggcccggggcccgacggcggccggcgccaccaccggcgcggc
tccccggaggaggtggccgagcgggagccccggcgccaccgcgcgcaccggcacgcgccc
gagcccggcaaggagggcgcggcgcccgggaccaagggcgagcggcgggcgcggcaccgc
ggcggcgcccgggccggcccgcgcgaggcggagagcggagaggagccggcgcggcggcac
cgcgggcgccacaaggcgccgccggcacacgaggaggccgagaaggagggcgaggcggag
gacagggaccaggagaaggagctccggaaccaccagccccaggagccacactgtgacctg
gaggccagtggggtaatgggtgtgggccctgtgcatgcactgcccagcacctgtctagag
aaggtagaagaacagccagaggatgcagataatcagcggaacgtcagtcggatgggcagt
caacccttggatctgagcaccactgtgcatatcccggtgacgctgaccggccctcccggg
gagaccactgttgtccccagtgggaacgtggacctggaaagccaagcagaagggaagaag
gaggtggaagctgatgacgtgatgaggagtggcccccgacccattgtcccgtacagctcc
atgttctgtctgagccccaccaacctgctccgccgcttctgccattacattgtgaccatg
cggtactttgaggtggtcattctcgtggtcatcgccctgagcagcatcgccctggctgct
gaggaccccgtgcagacagactcgcccaggaacaacgttctgaagtacatggactacatt
ttcacgggtgtctttaccttcgagatggtcataaagatgatcgatttgggactgctgctg
cacccgggtgcctacttccgggacctgtggaacattctggacttcattgtggtcagtggg
gccctggtggcgtttgccttctcaggctccaaagggaaagacatcaacaccatcaagtcg
ctgagggtcctgcgtgtgctgcggccactcaagaccatcaagcggctgcccaagctcaag
gcggtgttcgactgcgtggtgaactcgctcaagaacgtcctcaacatcctcatcgtctac
atgctcttcatgttcatcttcgccgtcatcgccgtgcagctcttcaaggggaagttcttc
tactgcacggacgagtccaaggagctggagcgggactgcaggggccagtacctggattac
gagaaggaggaggtggaagcccagcccaggcagtggaagaaatacgacttccactacgac
aacgtgctctgggccctgctgaccctgttcacagtgtccacgggagaaggctggcccacg
gtcctgaaacactcggtggacgccacctacgaggagcagggccccagccccgggtaccgc
atggagctctccatcttctatgtggtctacttcgtcgtcttccccttcttctttgtcaac
atctttgtggccttgatcatcatcaccttccaggagcagggggacaaggtcatgtcggaa
tgcagcctggagaagaacgagagggcttgcatcgacttcgccatcagcgccaagcccctg
acgcggtacatgccccagaacaagcagtcgttccagtacaagacctggacgttcgtggtc
tcgccccccttcgagtacttcatcatggccatgatcgccctcaacaccgtggtgctcatg
atgaagttctacgacgcgccctacgagtacgagctgatgctgaagtgcctgaacgttgtg
ttcacgtccatgttctccatggagtgcatgctcaagatcgtcgccttcggggtgctgaac
tatttccgagatgcctggaacgtcttcgactttgtcactgtgttgggaagtattactgat
attttagtaacagagattgcggaaacgaacaacttcatcaacctcagcttcctccgcctc
ttccgcgctgcccggctcatcaagctgctccgccaaggctataccatccgcatcctgctg
tggaccttcgtccagtccttcaaggccctgccctacgtgtgcctgctcatcgccatgctg
ttcttcatctatgccatcatcggcatgcaggtgtttggaaatattgccctggatgacgac
accagcatcaaccggcacaacaactttcggacgtttttacaagccctgatgctgctgttc
aggagcgccactggggaggcctggcatgagatcatgctgtcctgcctcagcagccgggcc
tgcgatgagctcgccaatgccactgagtgtgggagcgacttcgcctacttctactttgtc
tccttcatcttcctgtgctcctttctgatgctgaacctctttgtggctgtgatcatggac
aattttgagtaccttacacgggactcttccatcctggggcctcaccacctggatgagttc
atccgggtctgggctgagtatgacccggctgcgtgtgggcgcatcagttacaatgacatg
tttgagatgctgaaacacatgtccccacccctggggctggggaagaaatgccctgctcga
gttgcatacaagcgcctggttcgtatgaacatgcccatctccaacgaggacatgaccgtc
cacttcacgtccacgctgatggccctcatccggactgcactggagatcaagctggctcca
gctggcacgaagcagcatcagtgcgacgcggagttgaggnaagagatttcctgcgtgtgg
gccaatcttccccagaagactctggacttactggtgccaccccataaacccgacgagatg
accgtggggaaagtgtatgcagctctgatgatcttcgacttctacaagcagaacaaaacc
accagagaccagattcaccaggctcccgggggcctgtcccagatgggccccgtgtccctg
ttccatcctctgaaggccacgctggagcagacccagccgcagccggccgtgctccgcgga
gcccgcgtcttccttcggcagaagagctcggcctccctcagcaacgggggtgcagttcaa
acccaagagagtggcatcaaggaatctgtttcctggggcactcagaggacccaggagggg
ccccgcgaggtgaggccgcccctggaacgtggccattccacggagatcccagtggtacag
acaggaaagccggctgtggatgtccagatgcagagcatggccctgagaggccctgatggg
gagccgcaacccgggctggagagccagggccgagcagcctctatgcctcgcctggcggca
gaaactcagcccgccccagacgccagccccatgaagcgctccatctccacgctggcgccc
cagcgcccccatgtggctcatctctgcaacgccaccctggaccgcgctcccgccagccag
gccgccccccaccaccaccaccgctgccatcgccgcagggacaggaagcagaggtccctg
gagaaggggcccggcctgtctgcagacacggacggagcacccaacagcaccgcggggcca
gggccgcccccggtggacgggccagcaggctgccggcgggagcgcaggcaggagcgaggc
cggtcccaggagcggaggcagccctcctcctcctcctcggagaagcagcgcttctattcc
tgcgaccgcttcgggggccgtgagcccccccagcccaagccctccctcagcagccaccca
acatcgccaacggctgggcaggagccaggacccctgagacagggtagtggttcggtgaat
gggagccccctgctgtcaacatctggtgctagcacccctggccgcagtgggcggaggcag
ctcccccagacccccctgaccccccgtcccagcatcacctataagacggccaactcctca
cccgtccactttgccggggctcagaccagcctccccgccttctcccctggccggcttagc
cgtggcctttcagaacacaatgccctgctccagagagaccccctcagccagcccctggcc
cccagctctcgaatcggctctgacccttacctggggcagcgtctggacaacgagactgcc
cgtgcccagcctgaggacatgctcaccttcgaggaggctgtggccaccaactcgggccgc
tcctcccggacttcctacgtgtcttccttgacctcccagtcccaccccctccgccgtgtg
cccaacggctaccactgcactctggggctcagctcgggcagccgggtgcggcacagctac
caccaccccgaccaagaccactggtgctag

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