Sus scrofa (pig): 102166124
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Entry
102166124 CDS
T01009
Symbol
CSGALNACT1
Name
(RefSeq) LOW QUALITY PROTEIN: chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssc01100
Metabolic pathways
Module
ssc_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
102166124 (CSGALNACT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
102166124 (CSGALNACT1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
102166124 (CSGALNACT1)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
102166124 (CSGALNACT1)
Glycosyltransferases [BR:
ssc01003
]
Glycan extension
O-Glycan
102166124 (CSGALNACT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
DUF4618
Motif
Other DBs
NCBI-GeneID:
102166124
NCBI-ProteinID:
XP_020933838
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All DBs
Position
17:12145141..12498777
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AA seq
524 aa
AA seq
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MLRRGLLAWVSRVGVLLVLLCCAVSVLYMLACTPRGDSERRGLPGASGPTGRAGYQAALQ
EWEEQHRGYVGSLQRQIAQLKEELQERSAQLRTAQHLAGDPAGXPERAQADLLAFLRSQV
DRAEVHAGVKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELVEAIQSAV
EALNSPAESSPDQRPYTASDFIEGIYRTERDKGTLYELTFRGDHKHQFRRLVLFRPFGPI
MKVKKEELNMASTLVNIIVPLARRVDKFRQFMQNFREMCIQQDGRVHLTVVYFGKEEMNE
VKGILENTSRAANFRNFTFIPLNGEFSRGRGLDVGARAWRGGNVLLFFCDVDIYFTSGFL
NTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQ
YRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLVVVRTPVRGLFHLWHEKRCVDELTPE
QYKMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKQKTSSKKT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgccggggactcctcgcctgggtctcccgggtgggcgtcctgctcgtgctcctc
tgttgcgctgtctccgtcctctacatgctggcctgcaccccgagaggtgacagtgagcgg
cgggggctgcccggggccagcggccccaccggacgggccgggtaccaggcggcactgcag
gagtgggaggagcagcaccggggctacgtgggcagcctgcagaggcagatcgcacagctc
aaggaggagctgcaggagcggagcgcgcagctcaggactgcacagcacttggcgggcgac
cccgcgggcntccccgagagggcccaggccgacctgctggctttcctgcgctcccaggtg
gacagggcagaggtgcatgccggcgtcaagcaggccaccgagtacgccgcggtgcccttc
gacagcttcaccctgcagaaggtgtaccagctggagacgggcctgacccgacaccccgag
gagaagccggtgcggaaggacaagcgggacgagctggtggaggccatccagtcggccgtg
gaggccctaaacagcccggccgagagcagccccgaccagcgtccttacacggcctcggac
ttcatcgaagggatctaccgcacagaaagggataaaggcactttgtacgagctcacgttc
agaggggaccacaagcaccagttcagacgcctcgtcttgttccgaccgtttggccccatc
atgaaagtgaagaaagaggagctgaacatggccagcacgctggtcaacattatcgtgccc
ctggccaggagggtggacaagttccggcagttcatgcagaatttcagggagatgtgcatc
cagcaggatgggagagttcatctcactgttgtttactttggaaaagaagaaatgaatgag
gtcaaaggaatactcgaaaacacctccagagccgccaacttcaggaacttcaccttcatc
ccgctgaacggagagttctcccgagggaggggcctggacgtgggcgcccgtgcgtggagg
gggggcaacgtgctgctcttcttctgcgacgtggacatctacttcacctctggcttcctc
aacacctgcaggctgaacacgcagccaggcaagaaggtattttatccggtccttttcagt
cagtacaatcctggcataatttacggccatcatgatgcagtccctcccttagagcagcag
ctggtcataaagaaggagacagggttttggagagacttcgggtttgggatgacatgccag
taccgctctgacttcatcaacatcggtgggttcgacctggacatcaaaggctggggtggc
gaggacgtgcacctttaccgcaagtacctgcacagcaacctggtggtggtgcggacaccg
gtgcgcggcctcttccacctgtggcatgagaagcgctgcgtggatgagctgacgccggag
cagtacaagatgtgcatgcagtccaaggccatgaacgaggcgtcccacgggcagctgggg
atgctggtcttcaggcacgagatcgaggcccacctccgcaaacagaagcagaagacaagt
agcaagaaaacatga
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