Sus scrofa (pig): 106504063
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Entry
106504063 CDS
T01009
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03030
DNA replication
ssc03410
Base excision repair
ssc03420
Nucleotide excision repair
ssc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106504063 (RFC4)
03410 Base excision repair
106504063 (RFC4)
03420 Nucleotide excision repair
106504063 (RFC4)
03430 Mismatch repair
106504063 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssc03032
]
106504063 (RFC4)
03036 Chromosome and associated proteins [BR:
ssc03036
]
106504063 (RFC4)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
106504063 (RFC4)
DNA replication proteins [BR:
ssc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
106504063 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
106504063 (RFC4)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
106504063 (RFC4)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
106504063 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
106504063 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
DUF815
AAA_16
AAA_22
AAA_30
AAA_11
AAA_24
Mg_chelatase
AAA_28
RuvB_N
SLFN-g3_helicase
AAA_19
AAA_5
ResIII
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-GeneID:
106504063
NCBI-ProteinID:
XP_005652428
Ensembl:
ENSSSCG00000011804
UniProt:
A0A4X1UGI7
F1SFI3
LinkDB
All DBs
Position
13:complement(124589292..124604421)
Genome browser
AA seq
364 aa
AA seq
DB search
MQAFLKGTSISTKPPLTKDRGVAATARSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADKEHVKISDEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKEVTEKMITDIAGVVPTETIDGVLAACQSGSFDKLEAVVKDLIDEG
HAATQFVNQLHDVVVENDNLSDKQKSVITEKLAEADKCLADGADEHLQLISLCATVMQQL
TQNC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctaaaaggcacatctatcagcactaaaccaccattgaccaaggatcga
ggagtagctgccactgccagaagtagtggagagaacaagaaagccaaacctgtcccatgg
gtggaaaaatatcgcccaaaatgtgtagatgaagttgctttccaggaagaagtggttgca
gtgctgaaaaagtctttagaaggagctgatctccctaatctcttgttttatgggcctcct
ggaactggaaaaacatccactattttggcagcagctagagaactctttgggcctgaactt
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagttgttaga
gagaaagtaaagaattttgcccaattaactgtgtcaggaagccgttcagatgggaagcca
tgccctccttttaagattgtgattctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaggagtctaaaaccactcgattctgtctcatctgt
aactatgtcagtcgaataattgaacctctgacctctagatgttctaaattccgcttcaaa
cctctgtcagataaaattcaacagcagcgattactagacatcgctgataaagaacatgtc
aaaattagtgatgagggaatagcttatcttgttaaagtgtcagaaggagacttaagaaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaggaggtcacagaaaag
atgatcacagatattgctggggtagtaccgactgagacaattgatggagtacttgctgca
tgtcagagtggctcttttgacaaactagaagctgtggtaaaggacttaatagatgagggc
catgcagcaactcaatttgtaaatcagcttcatgatgtggtggtagaaaatgataacctt
tctgataagcagaagtctgttattacagagaaacttgctgaagcagataaatgcttagct
gatggtgctgatgaacatctacaactaataagcctctgtgctacagtgatgcaacagtta
actcagaattgttaa
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integrated database retrieval system
