Sus scrofa (pig): 106504138
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Entry
106504138 CDS
T01009
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
106504138 (GAPVD1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
106504138 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
106504138
NCBI-ProteinID:
XP_020924287
Ensembl:
ENSSSCG00000005602
UniProt:
A0A4X1UCK7
A0A286ZIP1
LinkDB
All DBs
Position
1:265948067..266030203
Genome browser
AA seq
1491 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLII
TSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLSRLRENPRLIASSLVAGEKL
NQENTQSVIYTVFTSLYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPSQQEKLFGEKGS
ERFRQKVQEMVESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRTKSSLGKFDKSCVAAFLDVVIGGRAVETPPMSSVNLLEGLSRTVVYITYSQLITLVNF
MKSVMSGDQLREDRMALDNLLANLPQPKPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
GQQLAAITAWDSSATNLTAHITLVTPFATRSRSRTNVLMDLHMDHEGSAQETIQEVQPEE
VLVISLGTGPQLTPGMMSENEVLNMQLSDGGQGDVPVDENKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNVDEDRLQEIAGAAAENMLGSLLCLPG
SGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDV
REVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDEIAHGAHQ
LTSPPSQSESLLAMFDPLSSHEGASAVVRPKVHYARPSHPPPDPPILEGAVGGNEARLPN
FSSHVLTPAEMEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPSWNRRPGNEERELPPAA
AIGATSLVAAPHSSSSSPSKDSSRGETEERKDSDDEKSDRNRPWWRKRFVSAMPKAPIPF
RKKEKQEKDKDDLGPDRFSTLTDDPSPRLSAQAQVAEDILDKYRNAIKRTSPSEGALANY
ESAGDNHEVMGDGESAHDSPRDETLQNISADDLPDSASQAAHPQDSAFSYRDAKKKLRLA
LCSADSVAFPVLTHSTRNGLPDHTDPEDNEIVCFLKVQIAEAINLQDKNLMAQLQETMRC
VCRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANR
YFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDVIWQNASE
EQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEV
YLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLV
FVLIKANPPCLLSTVQYISSFYASCLSGEESYWWMQFTAAVEFIKTIDDRK
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctagatattcatactctggcccatcacctgaagcaggaacgcttatacgta
aactctgagaaacagctcattcagaggcttaatgcagatgtacttaagacagccgaaaag
ttgtatcgtaccgcgtggatcgctaagcaacagagaattaatttggatcggcttatcata
accagtgctgaagcttcccctgctgaatgttgccaacatgccaagattttggaagataca
cagtttgtggatggatataagcaattggggtttcaggagactgcttatggagaattcttg
agtcgattaagggaaaatcctcgtcttattgcctcctctttggtggctggagagaaactt
aatcaggagaacacacaaagtgtcatttacacagtttttacctctctctatggcaactgc
atcatgcaggaagatgaaagctacctccttcaagttttgagatacttgattgaatttgaa
cttaaagaaagtgacaaccctaggcggcttttgaggagaggaacttgtgccttcagcatc
ttatttaaacttttttctgaaggactgttttctgccaaacttttcctcacagctacttta
catgagccaatcatgcagctgcttgtggaagatgaagatcacctggaaacagatccaaac
aagctgattgagaggttctccccctcacaacaggaaaaactctttggcgagaaaggctca
gagagattcaggcaaaaagttcaagagatggtagagtccaatgaagccaaactagtggct
ttggtgaacaaatttattggttatctcaagcagaacacgtactgctttcctcatagtttg
aggtggatcgtgtcacagatgtacaaaactctctcctgtgtagatagactggaagtcggg
gaggtcagggcaatgtgtactgatctccttttggcctgcttcatttgtcctgcagtggtc
aatccagaacagtatggaataatatccgatgctcctattaatgaggtggcaagatttaat
ctgatgcaggttggccgcctcttgcagcagttggcaatgactggctctgaagagggagat
ccccggacaaagagcagccttggcaaatttgacaaaagctgtgttgctgctttccttgat
gttgtgattggaggccgtgcagtggagacgccgccaatgtcctctgttaatcttctggaa
gggttgagccgaactgtggtttatataacctacagtcagcttattactctggtgaatttt
atgaagagtgtgatgtctggagatcaactgagggaagacagaatggctcttgacaattta
ttggcaaatctaccccagccaaagccaggaaaaagcagcagtttggaaatgactccctat
aatactccgcagttgtctccagcaaccactccagcaaataaaaagaatcgattgcctata
ggacaacagttagcagccatcactgcctgggattcctcagccaccaatcttactgctcat
attactctagtaaccccgtttgcaactcggagcagaagccgcaccaatgtgctaatggac
ttacatatggaccatgagggatcagctcaagaaaccatccaggaggtacagccagaagag
gtgttggtcatttccttaggaacaggtcctcagcttactccagggatgatgtcagaaaat
gaggtcctaaatatgcagctttcggatggagggcaaggagatgtccctgttgatgaaaac
aaactccacggtaaacctgataaaaccttgcgcttttccctctgcagtgataatctggaa
ggaatatctgaaggtccttcaaatcgttccaattcagtatcctcactagacctggaaggg
gaatctgtgtccgaacttggagcgggaccttctgggagtaatggagtggaagctctacag
ctgttagagcatgagcaagctacaacacaggataatcttgatgataagctaaggaagttt
gaaattcgtgacatgatgggtctgacagatgatagggatatatcagagacagtgagtgaa
acctggagtacagatgtcttgggaagtgattttgaccctaacgtcgatgaagatcgctta
caagaaattgcaggtgcagcagcggagaatatgttaggcagtttactctgcctgccaggt
tcagggtcagtgcttcttgacccctgcactggttctaccatatcagagacaacaagcgaa
gcttggagtgtagaggtattgccaagtgactcagaggccccagatctaaagcaggaggaa
cgtctgcaagaactggagagctgttctggactgggtagcacatctgatgatacggatgtc
agggaggtcagttcccgccccagcacaccaggcctcagtgttgtgtcgggtataagtgca
acctctgaggatattcccaataaaattgaagacctgaggtctgagtgcagctctgatttt
gggggtaaagactctgtcactagtccagacatggatgaaatagctcatggtgcccaccag
ctgacctctcctccttctcagtcagagtctctgctggccatgtttgatccactgtcttca
catgaaggggcttccgccgtggtaaggccaaaggttcactatgccaggccatcgcatcca
cctcccgaccccccaatcctggaaggagctgtgggaggaaatgaggccaggttgccaaac
ttcagttcccatgttttaactccagctgagatggaagcattcaaacaaaggcattcttac
cctgagagattagttcgcagcagaagctctgatatagtgtcttctgtccggcgacctatg
agtgaccccagctggaaccgacgtccagggaacgaagagcgagaactccctccagccgca
gccattggtgctacttctttggtggctgcacctcattcgtcatcgtcgtccccgagtaag
gactcctcaagaggagagactgaagaacgcaaagatagcgatgatgagaaatcagacagg
aacagaccttggtggagaaaacgttttgtttctgccatgcctaaagctcctataccattt
agaaagaaagaaaaacaagaaaaagacaaagatgatctggggcctgacagattctcaaca
ctcacagatgatcccagccctagactcagtgcacaagctcaggtcgctgaagatatcctg
gacaaatacaggaatgccattaaacgaaccagccccagtgaaggagcactggcaaactat
gagagtgcaggtgataatcatgaagttatgggtgatggtgaaagtgcccatgattcccct
cgtgatgagaccctgcaaaacatctcagctgatgatctcccggactccgcgagccaagca
gcccaccctcaggattcagctttctcttacagagatgcaaaaaagaaactgaggcttgct
ctttgctctgctgattctgttgctttcccagtgctaacccattcaacaaggaatggtttg
cccgaccacacagacccagaagacaatgaaattgtctgcttcctaaaagttcaaatagct
gaagcaattaatttacaagataagaacttgatggctcaactgcaagagacaatgcgttgt
gtgtgccgcttcgataataggacttgtaggaaactgttggcttctatcgccgaggactac
aggaaacgggccccctacattgcttacctcactcgctgtcgacaaggactgcagaccaca
caggctcacctggaaaggctgctgcaaagggttttgcgggacaaagaggtggccaatcgg
tattttaccactgtctgtgtgaggctgctgcttgagagcaaagaaaagaagatcagggaa
ttcattcaagactttcagaaactcacagcagctgatgataaaactgctcaggtggaagac
tttctgcagttcctttacggtgcgatggcccaggatgtcatctggcagaacgcaagtgaa
gagcagctccaggatgctcagctggccatcgagcggagtgtgatgaatcggatcttcaag
ctggctttctaccccaatcaggatggggacatactccgtgaccaggttcttcatgaacat
attcagagactgtctaaagtagtaactgcaaaccacagagctcttcagataccagaggtt
tatcttcgggaggctccgtggccatctgctcagtcagaaatcaggacgataagtgcttac
aagaccccccgggacaaagtgcagtgcatcctgagaatgtgctccacgatcatgaacctg
ctgagcctggccaacgaggactccgtcccaggagcggatgactttgtccccgtgttggtg
tttgtgttgataaaggcaaatccaccctgtttgctgtctactgttcagtatatcagcagc
ttttatgccagctgcctgtctggagaggagtcctattggtggatgcagttcacagcagca
gtggaattcattaaaaccatcgatgaccgaaagtga
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