Sus scrofa (pig): 106504154
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Entry
106504154 CDS
T01009
Name
(RefSeq) sex-determining region Y protein
KO
K09266
sex-determining region Y protein (SOX group A)
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
106504154
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106504154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106504154
NCBI-ProteinID:
XP_013842032
Ensembl:
ENSSSCG00000025728
UniProt:
Q5I921
LinkDB
All DBs
Position
Y:40553946..40555093
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AA seq
236 aa
AA seq
DB search
MVQSYASAMFRVLKADDYSPAAQQQNILALGKGSSLFPTDNHSSKDGRETRGSGRESGQD
RVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAEKRPFFEEAQRLQA
VHRDKYPGYKYRPRRKGERAQNLLPAEAAVLCSQVRVEERMYPFTYTVAKAKCSGTESQL
SHSQPMNITSSLLQQEDRCNWTGLCHSRVTSTRQIRADLPFHRGLQPGLSHIYFPY
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagtcatatgcttctgctatgttcagagtattgaaagcggacgattacagccca
gcggcacagcagcaaaatattctcgccttggggaaaggctcctcactatttccgacggac
aatcatagctcaaaggatggacgtgaaactagaggaagtggtagagagagtggccaggat
cgtgtcaagcgacccatgaacgctttcattgtgtggtctcgtgatcaaaggagaaaagtg
gctctagagaaccctcaaatgcaaaactcagagatcagcaagtggctgggatgcaagtgg
aaaatgcttacagaagccgaaaagcgcccattcttcgaggaggcacagaggctacaggcg
gtgcaccgagataaatacccgggctataaataccgacctcgtcgcaagggagagagggca
cagaatttgcttccggcagaggcggcagtactatgcagccaagtgcgcgtagaggagagg
atgtatcccttcacatacacagtcgccaaggccaagtgctcaggaacagaaagccagtta
agtcactcacagcccatgaacataaccagctcacttctgcaacaggaggatcgctgcaac
tggacaggcctgtgccacagtagggtaacatccacccggcagatccgcgccgacttgcct
tttcaccgtggtttacagccgggactttctcacatttattttccatattga
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