Sus scrofa (pig): 106504882
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Entry
106504882 CDS
T01009
Symbol
CADM1
Name
(RefSeq) LOW QUALITY PROTEIN: cell adhesion molecule 1
KO
K06781
cell adhesion molecule 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
106504882 (CADM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
106504882 (CADM1)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
Nectin family
106504882 (CADM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
Mucin
C1-set
Ig_C17orf99
Syndecan
Adhes-Ig_like
DUF5423
Motif
Other DBs
NCBI-GeneID:
106504882
NCBI-ProteinID:
XP_020918532
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Position
9:complement(42644487..42984934)
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AA seq
474 aa
AA seq
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MASAVLPSGPQCAAAAAAAAAAPPGLRLRLLLLLLSAAALIPTGDGQNLFTKDVTVIEGE
VATISCQVNKSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLLNFSSSELKVSLTNVSISD
EGRYFCQLYTDPPQESYTTITVLVPPRNLMIDIQKDTAVEGEEIEVNCTAMASKPATTIR
WFKGNKELKGKSEVEEWSDMYTVTSQLMLKVHKEDDGVPVICQVEHPAVTGNLQTQRYLE
VQYKPQVHIQMTYPLQGLTREGDALELTCEAIGKPQPVMVTWVRVDDEMPQHAVLSGPNL
FINNLNKTDNGTYRCEASNIVGKAHSDYMLYVYDPPTTIPPPTTTTTTTTTTTSTTILTI
ITDTTATTEPAVHGLTQLPNSAEELDSEDLSDSRAGEEGSIRAVDHAVIGGVVAVVVFAM
LCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNSEEKKEYFI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgctgtgctgccgagcggaccccagtgtgcggcggcggcggcggcggcggcg
gcggcgcctcccgggctccgactccggcttctgctgttgctcctctctgccgcggcactg
atccccacaggtgatggacagaatttgtttactaaagacgtgacagtgatcgagggcgaa
gttgcaaccatcagctgccaagtcaacaagagtgacgactctgttattcagctactgaat
cccaaccggcagaccatttatttcagggacttccggcctttgaaggacagcaggttccag
ctgctaaatttttcgagcagtgaactcaaagtgtcattgacgaatgtctcaatttctgac
gaaggaagatacttttgccagctctacactgaccctccccaggaaagttacaccacaatc
acagtcctggtcccaccacgtaacctgatgatcgatatccagaaagacactgcggtggaa
ggcgaggagattgaagtcaactgcacggccatggccagcaagccagccacgaccatcagg
tggttcaaagggaacaaggagctcaaaggcaagtcggaggtggaggagtggtcagacatg
tacacggtgaccagtcagctgatgctgaaggtgcacaaggaggacgatggcgtcccagtg
atctgtcaggtggagcacccagctgtcaccggaaacctgcagacccagcggtatctggaa
gtacagtataagcctcaagtgcatattcagatgacttaccctctacaaggcctaacccgg
gaaggggacgcgcttgagttaacatgtgaagccatcgggaagccccagcctgtgatggta
acttgggtgagagtcgatgacgaaatgcctcaacacgccgtgctgtcggggcccaacctg
ttcatcaataacctaaacaaaacagataatggtacctaccgctgtgaggcttcaaacata
gtggggaaggctcattcggattatatgctgtatgtatacgatccccccacaactatccct
cctcccacaaccaccaccaccaccaccaccaccaccacctccaccaccatccttaccatc
atcacagacaccacggcgacgacagaaccagcagttcacggccttactcagttgcccaat
tccgcagaagaactggacagtgaggacctctcagattctcgagcaggtgaagaaggctcc
atcagggcggtggatcacgccgtgattggcggcgtcgtggcggtggtggtgtttgccatg
ctgtgtttgctcatcatcctggggcgctattttgccagacataaaggtacatacttcact
catgaagccaaaggagccgatgatgcagcagacgcagacacagctataatcaatgcagaa
ggaggacagaacaactctgaagaaaagaaagagtacttcatctag
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