Sus scrofa (pig): 106507753
Help
Entry
106507753 CDS
T01009
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106507753 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
106507753 (CPSF2)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
106507753 (CPSF2)
U7-dependent histone pre-mRNA processing factors
106507753 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
106507753
NCBI-ProteinID:
XP_020955284
Ensembl:
ENSSSCG00000002447
UniProt:
A0A8D0K4Y0
A0A4X1SMG0
LinkDB
All DBs
Position
7:113659903..113690524
Genome browser
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGSVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDA
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctttctggggtccaagaagagtctgctctttgc
tatcttctccaagttgatgagtttagattcttactggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcatgtccatcagattgatgcagtgctgttg
tcccacccggatcctctccatcttggtgccctcccgtatgctgtcggaaagctgggtctg
aactgcgctatctatgcaaccattcctgtttataaaatgggtcaaatgttcatgtatgac
ctttaccagtcccgacacaatacagaagattttaccctctttacactagatgatgtggat
gcagcctttgataaaatacagcagttaaagttctctcagattgtgaatttgaaaggtaaa
ggacacggcttgtccatcacacctctgccagctggtcacatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccttccctacttatcaca
gactcatttaatgctacgtacgtgcagccccggagaaaacaaagggacgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaagtgtgttaatagcagtggacactgca
ggtagagttttggaacttgctcaactccttgatcaaatttggagaactaaagatgccgga
ttaggtgtttactcattggcactcctaaataatgtcagttataacgtggtggagttttct
aagtctcaggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaat
aatccatttcagtttcgccatctctctctctgtcacggtctttctgacttggctcgagta
cctagccctaaagtggtacttgccagccaacccgacctggaatgtggattttcaagggat
ctctttattcagtggtgtcaggaccctaaaaactcaatcattctaacttacagaactact
cctgggactttagcacgtttcctcattgataatccatctgaaaaaattacagaaatagag
ctgaggaaacgtgtaaagcttgaggggaaagaacttgaagaatacttggaaaaagagaaa
ctaaagaaagaagctgctaaaaaacttgagcagtcaaaagaggccgacatagattccagc
gatgagagcgacgttgaggaagatattgaccaaccatcagctcataagactaagcacgac
ctgatgatgaaaggtgaaggcagtcgtaaaggcagtttcttcaaacaggcgaaaaagtct
tatcctatgtttcctgccccagaagaaagaatcaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccggaacttcaagctactgaagaagaaaaaagcaaatta
gaatctggcctgacaaacggagatgaacccatggatcaggatttatctgatgttcctact
aagtgtatttctacgacagagtctattgaaataaaagccagggttacttacatcgactat
gaaggacgctctgatggggattccattaaaaaaatcatcaatcagatgaaaccacgacag
ttgatcattgtccatggaccaccagaggccagccaggatcttgcggagtgctgccgtgca
tttggtgggaaggatattaaagtgtacatgcctaagctacacgaaacagttgatgccact
agtgaaactcacatctaccaggtgagattgaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaattagcttggatagacggtgtcttagacatgagagtttcc
aaagtagacacaggagttattttagaagaaggagagctaaaggatgacggcgaagacgca
gaaatgcaggtggacgctccttcagactccagcgtcatagcccagcagaaggccatgaag
agtctgttcggagatgatgagaaagaaacaggtgaagaaagtgagatcattcctacactg
gaacccttaccacctcatgaggttcctggacatcagtcagtttttatgaacgaaccaaga
ctctctgacttcaaacaagttcttttacgagaggggatccaagctgaatttgtaggcggt
gtcctcgtttgcaacaatcaagtggcagtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
DBGET
integrated database retrieval system
