Sus scrofa (pig): 106509944
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Entry
106509944 CDS
T01009
Symbol
HHLA1
Name
(RefSeq) HERV-H LTR-associating protein 1
KO
K25558
HERV-H LTR-associating protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
106509944 (HHLA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4519
Motif
Other DBs
NCBI-GeneID:
106509944
NCBI-ProteinID:
XP_020946275
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All DBs
Position
4:8971719..9017912
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AA seq
853 aa
AA seq
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MAVRLLKALVEDGCHDDCKDVGNAPVSVYTPLTFLRPVLSRAVVDEADRRLLKFFEVIYP
ACETVFRGHGANRPRVKARAAPHKVKDLGQVVCHLSLGGVKVFLGLSGFLDSYTIKMIIA
STGLLDLLQLYHVGNSGYSASTWLVTQLLSSKCLLVCFQVAQSIPSMQGCLLLSPPVKLC
LGLTCILSLCHTVSAFQREAKKDNVMAFLSTSVSGLREEKRRENRITYLDTTELPARSVD
LSALNLTELVNGMLSRALKDSKKFFSLLSITSYSSFAFHKFSVAIYNISNLKTVDPAKFP
TRYCYCLNNRTNDLSDFTALLVDIIGNSTSYLTEIFKSTSILSVSQTNASDCIFICVMTG
KSGRNLSDLWEMAEKSPVINYTYTSSMSGVLGAATGGMALTSQLTPTSQQTLPWTSPPRG
AQSTGVSALRTSPGTEATLSSEREQTVNTNPLPELDTRATVRAATSLDSASPPLPASATR
MVAGTTWATAHRPSWASTQERIPGGPPWETPSFPPTSPAEAEEAVNTRSLSRLPAGTVTS
PSSPAQTGLTSGDIGEVSCLTHSIAPWNRSINGDAYNPVLLPLQWEHHHQRLETHWEGGW
TQSVPGGRSKGDADPELPPELGLLSTLICLLAPLPGRPDPLAPCCAASGPEMRSLLQPPP
PGIMRLPASPRSLHLTQEGSAKKKKEKRKEKKEGKKGKKEGTQAYLSLLIPGSSTASTQT
PSPTKAPAPKYPQTGSLSAEWPLTPGEDPALAPGSHQVSRCPAPLLGEGTVTATPLPLAI
RKLNPCLMELCRFFQQCLCMSQSRDPRMETARYCLDNYSWFLRNATYICQRARRVFHSHT
LKQKCLENICKSI
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggccgtaaggctgctcaaggcactggttgaggatggttgccatgacgactgcaaagat
gttggaaatgccccagtgagtgtctacaccccactgacgttcctccgcccagtcttgtca
agagccgtcgtggatgaggcagaccggaggctgcttaaattctttgaagtcatttatcct
gcttgcgagacagtgtttcggggccatggggccaaccgcccgagggtgaaggccagggct
gcccctcacaaggtcaaggatcttgggcaagttgtctgccatctctcactaggaggagtg
aaagtgtttctgggcctctctggattcttggacagctataccataaaaatgattattgct
tccacaggactcttagatctcctgcagttataccacgtggggaattctggatattctgca
tcgacgtggttagtcacccagctgctttcctccaagtgcttgcttgtttgcttccaggtg
gcccagagcatccccagcatgcaaggctgcctgctactcagtcctccggtgaagctctgc
ctgggcctcacatgcatcctgtccctttgccacacagtgtctgcctttcaaagagaagcc
aagaaggacaatgtcatggcgttcctctccacatcagtgtctggcctcagagaagagaaa
aggcgagaaaacaggatcacttatctggataccacggagctgcctgcaaggtcggttgat
ttgtctgcacttaacctgaccgagctggtcaacgggatgctgagtcgagctttaaaagac
agcaagaagttcttctctttgctgagtattacttcctacagctccttcgccttccacaag
ttttctgtggccatttacaacatttctaacctgaagactgtggatccagccaaattcccc
acgcggtactgctattgcttgaacaatcggaccaacgatttatcagatttcactgcccta
ctggtggacatcattggaaattccaccagctacctcacagagattttcaagtcaacttcc
atcctctcagtgagtcaaacaaatgcatctgactgcatcttcatctgtgtgatgacagga
aagtcaggaaggaatctttctgacctctgggagatggcggaaaaatctcctgttatcaat
tacacatataccagcagcatgtctggtgttctgggtgcagctaccggggggatggccctg
acctcacagctcacacccacaagccagcagacactgccatggacaagcccccctagagga
gcccagagcactggagtgtctgctctcagaacctctcctgggacagaagccactctgtct
tcagagagagagcagactgtgaacacaaacccacttcctgagcttgacaccagagccacg
gtcagagccgccaccagtctggacagcgcctctccccccctcccagcatcagctaccagg
atggtggccggaactacatgggcgacagcccacaggccgtcatgggcttccacccaggag
agaattcctggggggcctccctgggaaacgccttccttcccgccgacgtctcctgcagag
gccgaggaggcggtgaacacaaggagcctctcccggcttcctgctgggacagtgacctct
cccagcagcccagcccagaccggcctgacctcaggtgacattggtgaggtgtcctgctta
acacatagcatagcaccttggaaccgctccatcaacggcgatgcctacaaccccgtcctg
ctgcccctgcaatgggagcatcaccaccagcgtctggagacacactgggaagggggctgg
acacagtcagtgcccggaggaagatccaaaggggatgctgacccggagttgcccccggag
ttgggccttctgtccacactcatctgtttgctcgcccctctgcctggaaggcccgacccc
ctcgccccctgctgtgctgcttctggcccagagatgaggtccctgctccagcccccaccc
cctgggatcatgcggctcccagcctcaccccgttccttgcacttgacccaagagggttcc
gccaaaaaaaaaaaagaaaaaagaaaagaaaagaaagaagggaagaaaggaaagaaggaa
ggaactcaagcttacctctctcttctcatcccaggctcatccaccgccagcacacagacg
ccgagtcctaccaaggcgccggctcccaaatacccacagacaggtagtctctctgcggag
tggcccttgacccccggagaagacccagccctggccccaggatcccaccaagtttcaagg
tgtcctgcaccgctcctcggagaggggaccgtcacagctacccctctcccactggccatc
cggaagctcaacccttgcctgatggagctgtgccgctttttccagcaatgcctctgcatg
agccagagcagagaccccaggatggaaactgcgagatattgtcttgacaattattcctgg
tttctgaggaatgcaacctacatctgtcagagagcgagacgggtgttccactcacacacc
ttgaaacaaaaatgcctcgagaatatttgcaagtctatctga
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