Sus scrofa (pig): 110255866
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Entry
110255866 CDS
T01009
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
110255866 (SOX1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110255866 (SOX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110255866
NCBI-ProteinID:
XP_020921594
UniProt:
A0A8W4FKE1
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All DBs
Position
11:77985771..77989383
Genome browser
AA seq
384 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGAKANQDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGAAAVGQRLESPGGAAGGGYAHVNGW
ANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPHNPQPMH
RYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAAAAAAAS
SGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAAAAQSR
LHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctgtcgggcccggccggggcgggcgggggcggaggtggcggcggcgggggcgccaag
gccaaccaggaccgggtcaagcggcccatgaacgccttcatggtgtggtcccgcggacag
cggcgcaagatggcccaggagaacccgaagatgcacaactcggagatcagcaagcgcctg
ggtgccgagtggaaggtcatgtccgaggccgagaagcggccgttcatcgacgaggccaag
cgactgcgcgccctgcacatgaaggagcacccggattacaagtaccggccgcgccgcaag
accaagacgctgctcaagaaggacaagtactcgctggccggcgggctgctggcggccggc
gcgggcggcggcggtgcggccgtggccatgggcgtgggtgtgggcgccgcggccgtgggc
cagcgcctcgagagcccgggcggcgcggcgggcggcggctacgcgcacgtcaacggctgg
gccaacggcgcctaccccggctcggtggcggcggcggcggccgccgcagccatgatgcag
gaggcgcagctggcctacgggcagcaccccggcgcgggcggcgcgcacccgcacgcgcac
ccggcgcacccgcacccgcaccacccgcacgcgcacccgcacaacccgcagcccatgcac
cgctacgacatgggcgcgctgcagtacagccccatctccaactcccagggctacatgagc
gcctcgccctcgggctacggcggcctcccctacggcgccgcggccgccgccgccgccgcc
gcgggcggcgcgcaccagaactcggccgtggcggcggcggcggcagcggcggccgcgtcg
tccggcgccctgggcgcgctcggctcgctggtcaagtcggagccgagtggcagcccgccg
gccccggcgcactcgcgggcgccgtgccccggggacctgcgcgagatgatcagcatgtac
ttgccggctggcgagggcggcgacccggcggcggcggcggccgccgcggcgcagagccgg
ctgcactcgctaccgcagcactaccagggcgcgggcgccggcgtcaacggcacggtgccc
ctgacgcacatttag
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