Sus scrofa (pig): 110255969
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Entry
110255969 CDS
T01009
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssc03016
]
110255969 (TSEN54)
Transfer RNA biogenesis [BR:
ssc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
110255969 (TSEN54)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
110255969
NCBI-ProteinID:
XP_020922306
UniProt:
A0A4X1V181
A0A287A2T3
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Position
12:complement(5847170..5855791)
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AA seq
529 aa
AA seq
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MEPEPGSAEVEVPPGRVLSVPELFAARSRPQKLPQRSHGPKDFLPDGSAAQAERLRLCRE
ELWQLLAEERVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYL
LECGSIQLFHEDLPLSIQEAYQLLLTEDTVTFLQYQVFSHLKRLGYVVRRFQPSSVLSPY
ERQLNLDGQHLEDRHGKRKRRSASSRSINKKPKALENPLQGVDGTPESLATSSPPPRNQN
SRCPEEKPQESSPVKGPEGPSQLLGSLEPCPGLPREGVRCSQESGKVENGVQGPCKPRWN
FEQISFPNMASDGRHTLLLAPAPELLPANVAGRETDAEPWCQKLNQRKEKLSRREREQQA
EAQHFREDVNSDPEVQRCSSWQEYKQLLQRRHLQKTQSRPPHLWDQAVTPLLSPGQADSP
ATALQLISVLQTTHLADGGARLLEKSGGLEISFDVYQADAVATFRKNNPGKPYVRMCISG
FDEPVPDLCTLKRLSYQSGDVPLIFALVDHGDISFYSVRDFTLPKDVEH
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgaacctgggtccgccgaggtggaggttcctcccgggcgcgtgctcagtgtg
ccggagctcttcgccgcccgctcgcggccccagaagctgccccagcgctcgcatggcccc
aaggacttccttcccgacggctcggcggcccaggctgagcggctgcgcttgtgccgcgag
gagctctggcagctgctggcggaggagcgcgtggagcgcctgggcagtttggtggccgcc
gagtggagaccggaagaaggcttcgtggagctgaagtctcctgcgggtaaattctggcag
actatgggcttctcagagcagggacggcagcggcttcacccagaagaggccttgtatctg
ctggagtgtggttccatccagctcttccacgaagacctgccactgtctatccaggaggcc
taccagctgctgctgactgaggacactgtgactttcctgcagtaccaggtcttcagccac
ctgaagagactgggctatgtggttcgacgattccaacccagctccgtcctgtccccttac
gagaggcagctgaacttggacggccagcacttggaggatcggcacggcaagaggaagagg
aggagcgccagctctcggtccattaataagaagcccaaggccctggagaaccccctgcag
ggggtggatgggacacccgagagcctggcaacctccagcccacctccccgaaaccagaac
agccgatgcccagaggagaaaccccaggagtcaagccctgtaaagggcccagagggcccc
tcccagcttctggggtccctggagccctgccctggtctgcccagggagggggtgcggtgc
agccaggagagtggcaaagtagagaatggggtccaggggccgtgtaagccacgctggaac
tttgagcaaatctccttccccaacatggcttcagacggccgccataccctcctgcttgcc
cccgcgccagagctgctcccggccaatgtcgccgggcgggagacggacgccgagccctgg
tgccagaagctcaaccagcggaaggagaagctctccaggcgggaacgggagcagcaggca
gaggcccagcacttccgggaggacgtgaactcagatcccgaggtgcagcgctgctccagc
tggcaggagtacaagcagctgctgcagaggcggcacctgcagaagacccagagccgcccc
ccacacctctgggaccaggctgtcacccccttgctgagtcctggtcaagcagactcccca
gccacagcccttcagcttatctctgtgctgcagacaacacaccttgccgatggaggtgcc
cggctgctcgagaagtctggaggcttggagatcagctttgatgtctaccaggctgacgct
gtggccacgttccgaaagaataaccccggcaagccctacgttcggatgtgcattagtgga
tttgatgagccagtcccagacctctgcaccctcaagcggttgtcctaccagagcggggat
gttcctctgatctttgccctggtggatcacggagacatctccttctacagcgtcagggac
ttcacgctgcccaaggatgtggaacactga
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