Sus scrofa (pig): 110256115
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Entry
110256115 CDS
T01009
Symbol
TRIM16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
110256115 (TRIM16)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110256115 (TRIM16)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110256115 (TRIM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
ANCHR-like_BBOX
DUF4015
Motif
Other DBs
NCBI-GeneID:
110256115
NCBI-ProteinID:
XP_020923569
UniProt:
A0A8D2C4I8
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All DBs
Position
12:complement(58926083..58940642)
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AA seq
582 aa
AA seq
DB search
MAELELMAPGPLPGVPTHPPATLSPDLASASLAEEDSASLESPPGEPGGQGSLAEEDSAS
LESPPGESGGQGSGSADSAGQEGPKAEGEEEEVLCDFCLGASRVRAVKSCLTCMVNYCPE
HLRPHQENSKLHGHQLTEPTKDRDLRVCPAHRSPLVAFCCSDGQCICRECGQGEHRGHTL
VSLDTARRDKETELQNTQLDLEQKLKLNENAIARLQDNHKSVLVSVSEVKAVAEEQFGEL
LAAVRKAQADAMLFLEEKEQAALGQASGIKTHLECRSAEMERTRQELDRIAAISNPVLFL
EEYCQFKHTEDGAFPSVYIGLKDRLSGIRKVITDSTAHLIQLLQDYKARLQEFSKEGEFD
IRTQVSAIIEHKHRASRPEPSTRPQFLQYACDIAFDPDTAHRYLRLQEDNRKVTNTAPWE
HPYPDLPSRFTHWRQVLAQQSLYLHRYYFELELSGAGVYVGLTCKGIDRKGEERNSCISG
NSFSWSLHWDGKAFRAWHSDTETPLKASPCRRLGVYVDSPGGVLSFYGVEPDAMTLVHRF
DCRFSEPVYPAFWLSKKEDAIRIVDLGEELGKPAPTSVEAAP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattggagctgatggccccagggccgctgcccggggtccccactcaccctcca
gccactctcagcccagacttggcttcagccagcctggcagaggaggactcagcctccctg
gagagtcccccaggggagcctgggggacagggcagcctggcagaggaggactcagcctcc
ctggagagtcccccaggggagtctgggggacagggcagcggttctgccgactctgccggg
caggagggccccaaggccgagggggaggaggaggaggtcctgtgtgacttctgcctcggg
gccagcagggtgagggccgtgaagtcctgcctgacctgcatggtgaactactgccctgag
cacctgcggccgcaccaggagaacagcaagctgcatggccaccagctgaccgagcccacc
aaggaccgggacctgcgcgtgtgccctgcccaccgcagcccgctggtcgccttctgctgc
tcagatgggcagtgcatctgccgggagtgcggccagggcgagcacaggggccacaccttg
gtctccctggacaccgcccgcagggacaaggagactgagcttcagaacacccagttagac
ctggagcagaaactcaagttgaatgaaaatgccatcgccaggctccaagacaaccacaag
tctgttttggtctccgtgtcggaggtgaaggcagtggccgaggagcaattcggggagctc
cttgctgccgtgaggaaggcccaggccgacgcgatgctcttcctggaggagaaggagcag
gccgccctgggccaggccagcggcatcaagacccacctggagtgcaggagcgcggagatg
gagaggaccaggcaggagctggacaggatcgctgccatcagcaaccccgtgctgttcctg
gaggagtactgccagttcaagcacacagaggacggcgccttccccagcgtctacatcgga
ctcaaggacaggctctcaggcatccgcaaggtcatcacggactccacggcgcacttgatc
cagttgctgcaggattacaaggcgcggctccaggagttctccaaggagggggagtttgac
atcaggactcaagtgtctgccatcatcgagcacaagcatcgcgcctccaggcccgagccc
agcaccaggccgcagttcctgcagtacgcctgtgacattgccttcgacccggacacggca
cacaggtacctccggctgcaggaggacaaccgcaaggtcaccaacaccgcgccctgggag
cacccctaccccgacctccccagcaggttcacgcactggcggcaggtgctggcccagcag
agcctgtacctgcacaggtactacttcgagctggagctctccggggccggcgtctacgta
ggcctgacgtgcaaaggcatcgaccggaagggcgaggaacgcaacagctgcatttctgga
aacagcttctcctggagcctccactgggacgggaaggcgttcagggcctggcacagcgac
acggagaccccgctcaaggccagcccttgccggaggctgggggtctacgtggactctccg
ggcggggtcctctccttctacggcgtggagcccgatgccatgactctggtgcacaggttt
gactgcaggttctcggagcccgtctaccccgccttctggctttccaagaaggaggacgcc
atccggattgtggatctgggagaggaactgggaaagccggcgcccacctcagtggaggct
gctccctag
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