Sus scrofa (pig): 110256137
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Entry
110256137 CDS
T01009
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
110256137 (RAI1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
110256137 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
110256137
NCBI-ProteinID:
XP_020923680
UniProt:
A0A8D1ZMY5
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All DBs
Position
12:complement(60751159..60854710)
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AA seq
1897 aa
AA seq
DB search
MQSFRERCGFHGKQQSYPQTSQPTSRLENYRQPSQAGLSCDRQRLLAKDYYNLQPYPGYE
GGAPTPASAARAGKGLSSQQALQGRPAFAGYAVQDSGPYPGRYSGEDSLQAWGTPQPPPP
QLQPLPGGVGKYDENLMKKTAVPPGRQYAEQGAQLPFRTHPLHVQQPQLPQPPQPPAYPK
LQRQKPQNDMASPLPFPRGGPFPQHSQSFPAASTYSSAGQGAHSYKGCTAPSAQPHDRPL
TASASLGPGQRVQSLHAYPSSRLSYEPQKQQQQQQQQQQQQALQSRHHAQETLHYPNLAK
YQHYGQQGPGYCPPDTAVRTPEQYYQTFSPGSGHSPARSVGRSPSYSSTPSPLMPNLETF
PYGQQPLGSGAFPAGLPDHSHFMPLLNPSPTDAAGSVDAQAATCKALQKDKLPDALLSDL
SLQSLTALTSQVENISNTVQQLLLSKAAGPPKKGVKGLVSRAPEPLKSQHCSPEGGGYAA
EPVGTPLSEPLSSTPQSTHAEPPEADYLSGSEDPLERGFLYCSQARGSPARVRGGSKATP
ESVSTCSVTSPDDMSTKSDDSFQSLHSSLPLDSFSKLVAGERDCPRLLLSALAQEDLASE
ILGLQEAIGEKAEKAWAEAPGLATDAGKTAFSLENHSACLDPVAKGTWPRPGEPEALPEP
LQLDKAGSAKDFSPGLFENAPVAFATPDPKKTAGPLSFGTKPTLGAGASDPTAAAFDCFP
DATAASSADGANPFAWPEENLGDACPRWGLHPGELGRGLEQGGKAVDSVGQESAREASAC
LGFPEEEPPGEKAAGPRGSKQEEAGGVKEEAGGLLQCPEGGKADRWLDDGRHCCSAADFG
DLPLLPPPPGRKEDLEAEEYSSLCQLLGSPEQRPGVQDPLSPKASLLCGKEEVEEVLDPK
AGWGSPCPLSGESVILLGPTVGAESKVQSWFEASLSHMKPGEEGPDAALAPGDPSSLAPD
APLAQMPNKPAGPEAPIAKKEPVPRGKSLRSRRVQRGLPEAEDSPCRAPALPKDLLLPES
CTGPPQGQTDGAGAPGRGASEGLPRMCTRSFTALSEPRTPGPPGLPTTPAPPDKLGGKQR
AAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPDAPGTDQRSMTLRSR
TRTQEAFHSKRRRPSESRLPNCRAAKKLLANHHLPAAFKAAGSPQKEARASQRARVPKPG
AGGKPSDRPLHALKRKSAFMAPVPTKKRSLALRGGAGDAKEAGAEGSPPLFKRVASPKKA
KPPKGNGEPPGKPLPPETPDACLKLASRASFQGAPKTKVLPPRKGRGLKLEAIVQKITSP
SLKKFACKAAGGPPGTPLSPAPPEKERALKGAGGSPLAAEEGLLTLGPGQKFPAAPGAEP
LCRNPTNRSLKGKLVNSKQLSSTDCFKTEAFPSPEALLPGGASLAPKKRSRKGRAGAPGL
PKGSLEKQPHLGPALLLAPRDRANGTQGGSEDSSGGGGKKPKTEELGLASQPPEGRPCQP
QTRAQKQPGHANYSSYSKRKRLTRGRAKNAAASSSPCKGRAKRRRQQQVLPLDPAEPEIR
LKYISSCKRLRADSRSPAFSPFVRVEKRDAFTTVCTVINSPGEEPQPHRKPSSSTSSSSS
CSFALDATGASLPTLPGGSGLQPRPCLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFK
DLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCEEAALPLERTLKGLECPAATSATTAAAT
GKPPRPDGGPADPAKQGSLRTSARGLSRRLQSCYCCDGRGDGGEEAAPADKSRRHECSKE
PPAEAGGDTQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDRTCSSCQEAGATIGCC
HEGCLHAYHYPCASDAGCVFVEENFSLKCPKHKRLPL
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagagctacccgcagacc
tcacagccgacgtctcgcctggagaactacaggcagccgagccaggccgggctgagctgc
gaccggcagcgcctgctggccaaggactattacaacctgcagccgtacccgggctacgag
ggcggcgccccgacgcccgccagcgccgcgcgcgccggcaaaggcctctcctcgcagcag
gccctgcaggggaggccggccttcgcgggctacgccgtccaggacagcggcccgtacccg
ggccgctactcgggcgaggacagcctgcaggcctgggggaccccccagccgccacccccc
cagctgcagcccctgcccgggggggtgggcaaatatgacgagaacctgatgaaaaagacg
gcggtgccccccggccggcagtacgcggagcagggcgcccagctgccctttcggactcac
ccgctccacgtccagcagccgcagctgccgcagcccccgcagccccccgcgtaccccaag
ctccaaaggcagaagccacagaacgacatggcctcgcctctgccctttccccggggcggc
cccttcccccagcactcccagtccttcccagccgcctccacctactcctccgccgggcag
ggggcccactcctacaagggctgcacggcgccatccgcgcagccccacgaccggcccctg
actgccagcgccagcctgggccccggccagcgggtccagagcctccacgcttacccgtcc
agccgcctcagctacgagccgcagaagcagcagcagcaacagcagcagcagcagcagcag
caggcccttcagagccgccaccacgcccaggaaacgctgcactacccgaacctggccaag
taccaacactacgggcagcagggcccgggctactgcccgccggacacggccgtcaggacc
ccggagcagtactaccagaccttcagccccggctccggccactcgcccgcgcgctccgtg
ggccgctccccttcgtacagctccaccccgtcgccgctgatgcccaacctggagaccttc
ccctacggccagcagccgctgggcagcggcgccttccccgccggcctccccgaccacagc
cacttcatgcccctgctcaacccctcccccacggacgccgccggctccgtggacgcccag
gcggccacctgcaaggccctgcagaaggacaagctgcccgacgccctgctgtcggacctc
agcctgcagagcctcacggcgctgacctcgcaggtggagaacatctccaacacggtccag
cagctgctgctgtccaaggcggccgggcccccgaagaagggcgtcaagggcctggtgtcc
cgggccccggagccgctcaagagccagcactgcagccccgagggcggcggctacgcggcc
gagccggtgggcacgccgctctcggagccgctgagcagcacgccgcagtccacgcacgcc
gagccgcccgaggccgactacctgagcggctccgaggacccgctggagcggggcttcctc
tactgcagccaggcccgcggcagccccgcccgggtccgcggcggctccaaggccacgccc
gagtccgtgtccacctgctccgtgacctcccccgacgacatgtccaccaagtccgacgac
tccttccagagcctgcacagcagcctaccgctcgacagcttctccaagctggtggccggc
gagcgggactgcccgcggctgctgctcagcgccctggcgcaggaagacctggcctccgag
atcctggggctgcaggaggccatcggcgagaaagccgagaaggcctgggccgaggcgccc
ggcctggccacggacgccggcaagacggccttctcgctggagaaccacagcgcctgtctg
gaccccgtggccaagggcacgtggccgcggccaggggagccggaggccctgcccgagccc
ttgcagctggacaaggctggcagcgccaaggacttcagcccggggctgttcgaaaacgcc
cccgtggcctttgccacccctgaccccaagaagacggcgggccccctctcctttggcacc
aagcccaccctcggagctggcgcctcggaccccaccgcggccgccttcgactgcttcccc
gacgcgacggccgccagctcggccgacggcgccaatcccttcgcctggcccgaggagaac
ctgggggacgcctgtccccgctgggggctgcaccccggcgagctcggcagggggctggag
cagggcgggaaggccgtggacagtgtcggccaggagagcgcccgcgaggcctcggcctgc
ctgggcttcccggaggaggagcccccgggggagaaggccgcggggccacggggctccaag
caggaggaggcgggcggggtgaaggaggaggcgggcgggctgctgcagtgccccgagggg
ggcaaggccgaccggtggctggacgacggcaggcactgctgctccgccgccgacttcggg
gacctcccgctgctgccgccaccgccgggcaggaaggaggacctggaggccgaggagtac
tcctccctgtgccagctcctgggcagccctgagcagaggccgggcgtgcaggacccgctg
tcgccgaaggcctcgctgctgtgcggcaaggaggaggtggaggaggtgctggaccccaag
gccggctggggctccccctgccccctctctggggagtccgtcatcctgctgggccccacc
gtgggtgccgagtccaaggtccagagctggtttgaggcctccctgtcccacatgaagcca
ggggaggaggggcccgatgcggcgctggctccgggggatccctcctccctggcccccgac
gcccctctggcccagatgcccaacaagcctgctgggcccgaggcgcccatcgccaagaag
gagcctgtgccccgtggcaagagcttacggagccggcgggtgcagcgggggctgcccgag
gccgaggactccccgtgccgggcgccggcgctgcccaaagacctgctgctccccgagtcg
tgcacggggcccccccagggccagacggacggggcaggggccccgggccggggggcctcg
gaagggctccccaggatgtgcacccgctccttcacggccctgagcgagccccgcacgccc
ggccccccaggcctgcccaccacccccgcccccccagacaagctcgggggcaagcagcga
gccgccttcaagtcgggcaagcgggtggggaagccctcgcccaaggccgcgtccagcccc
agtaaccccgccgccctgcccgtggcctccgacagcagccccatgggctccaagaccaag
gagacagactcgccggacgcgccgggcacagaccagcgctccatgacgctccggtcccgc
acccggacccaggaggccttccactccaagcggcggcggccctcggagagccggctcccc
aactgccgcgccgccaagaagctgctggccaaccaccacctgcccgccgcgttcaaggcc
gccggcagcccccagaaggaggccagggccagccagcgggcccgggtccccaagccgggc
gccggcggcaagccctccgatcggccgctccacgccctcaagaggaagtcggccttcatg
gcacccgtgcccaccaagaagcgcagcctggccttacgcggcggagccggggatgccaag
gaggcgggggccgaggggtccccccctctcttcaagagggtggcttcccccaagaaggcc
aagccccccaagggcaacggggagcccccggggaagccactgccccccgagacccccgac
gcctgcctgaagctggcctcgcgggcgtccttccagggggccccgaagaccaaggtgctg
ccgccccggaagggccggggcctcaagctcgaggccatcgtgcagaagatcacctccccc
agcctcaagaagtttgcgtgcaaggcggcggggggccctcccgggactcctctgagccca
gcgccccccgagaaggagcgggcgctcaagggcgcggggggcagccccctggcggccgag
gaggggctcctgaccctgggccccgggcagaagttcccagcagcgccgggggccgagccg
ttgtgcagaaatccgaccaacagatccttaaaaggcaaactcgtgaacagtaagcaactg
tcctcgacggactgtttcaaaacagaggccttcccgtccccagaggccctgctgcccggg
ggcgcttccctggcgcccaagaagaggagccggaaaggcagggcgggagccccgggcctc
cccaaaggctccctggagaagcagccccatctcggcccggctctgctcctggctccccga
gacagggccaacggcacgcaggggggcagcgaggacagctccggcggaggcggcaagaag
ccaaagacagaggagctgggcctggcctcccagccccctgagggccggccctgccagccc
cagaccagggcacagaagcagccgggccacgccaactacagcagctattctaagcggaag
cgcctcacgcggggccgggccaagaacgccgccgcctcctcctcgccctgtaaggggcgt
gccaagcggcggcggcagcagcaggtgctgcccctggatcccgcagagcctgaaatccgc
ctcaagtacatttcctcctgcaagcggctgcgggccgacagccgctcccccgccttctcg
cccttcgtgcgggtggagaagcgggacgcgttcaccaccgtgtgcactgtcatcaactcc
ccgggcgaggagccccagccccaccggaagccttcctcctccacctcctcctcctcctcc
tgctccttcgccttggacgcgaccggggcctccctccccacgctccctggcggctccggc
ctgcagccgcggccctgcctgcccctctcctccaccatgcatctggggcccgtggtctcc
aaggccctgagtacctcttgccttgtttgctgcctctgccaaaacccagccaacttcaag
gacctcggggacctctgcgggccctactaccccgaacactgcctccccaaaaagaagcca
aaactcaaggagaaggtgcggccagagggcacctgtgaggaggccgcgctgcctctggag
aggacactcaaaggcctcgagtgcccagccgccacctctgccaccaccgctgccgccacc
gggaagccccccaggcctgacggcggcccagctgacccagccaagcagggctccctgcgc
accagcgcccggggcctgtcccggcggctgcagagttgctactgctgtgacggtcggggg
gacggcggcgaggaggccgccccggctgacaagagccgcaggcacgagtgcagcaaggag
cctcccgcggaggctggcggggacacccaggagcactgggtgcacgaggcctgtgccgtg
tggacaggcggggtttacctggtggccgggaagctctttgggctgcaggaggccatgaag
gtggccgtggacaggacttgttccagctgccaagaagccggggccaccatcgggtgctgt
cacgaaggatgcctccacgcctatcattacccgtgtgccagcgacgcgggttgcgtcttc
gtcgaagagaacttttctttgaaatgccccaaacataagaggctgccgttgtaa
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