Sus scrofa (pig): 110256288
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Entry
110256288 CDS
T01009
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110256288 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
110256288 (MBD4)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
110256288 (MBD4)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
110256288 (MBD4)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110256288 (MBD4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
110256288
NCBI-ProteinID:
XP_020925018
UniProt:
A0A8D1B5I2
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Position
13:complement(68816677..68828559)
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AA seq
588 aa
AA seq
DB search
MESPSPGDCGAAPLITATERLDSDRPCDLRQVIVPFRAAVSPPEKWERGSREEDVALGSE
RVGEDEKQIVIKSSSECTPLLEEPLASAEFDGTAVTECHKSVPCGWERLVKQRLSGKTAG
RYDVYFISPQGLKFRSKRSLASYLHKSGETSLKLEDFDFTVRPKRSIKLGCQDHSMAGLT
SRLQSSSNRSLRTRSRWKQNVSPLPSGSLELQDSRELSNFTAVHLLLKEDEGINDIDSRK
VRKSKGKVTILKGIQIKKTKSGPRKRLPDPVHSDRKRESVYTKSADAASEPLAQESQTER
TCCVSDIRASDKTLCVTQEEERLGQEESLSSGSKFEQFTSGIINRFCLTEEAEHNKKYED
TFLESEEVRKKVEVGERKEHLHIDISKDGSEMDSCSQTEKDSTVKILQEDTIPRTQVEKR
KTSLYFSSKYNKEALSPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGK
MAIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDHRAKTIIKFSDEYLTKQWRYPI
ELHGIGKYGNDSYRIFCVNEWKQVHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccgagccccggggactgcggagctgcacctttgatcaccgccactgagcgc
ctagactcagaccggccctgtgacctccggcaagtcattgtcccctttcgggccgcagtt
tcaccacctgaaaaatgggagagagggagtagggaggaagatgttgctctgggatcagaa
agagtgggagaagatgagaaacaaatagtgataaaaagcagcagtgagtgtactcctctg
ctagaggaacccttggcttctgctgagtttgatggcactgcagtgacagagtgccacaag
tctgtcccatgcggatgggaaaggcttgtgaagcaaaggttatctgggaaaacagcagga
agatatgatgtctattttatcagcccacagggactgaagttcagatcgaaacgctcactt
gctagttatcttcacaaaagtggagagacttctcttaagctagaagattttgattttact
gtacgtcctaaaaggagcatcaaattaggatgtcaagaccacagcatggcaggtctgaca
tcccgactgcaaagcagttcaaaccggagcctcagaacacggagcaggtggaaacaaaat
gtgagtcctctgccaagtgggagtttggaattgcaagatagcagagaactgtctaacttt
accgccgttcatctgcttttgaaagaagatgagggaattaatgacattgactctagaaag
gttagaaagtccaaaggaaaggtgactattttgaaaggaattcaaattaagaaaactaaa
tcagggccccggaagagacttccagatcctgttcatagtgacaggaaaagagaatctgtg
tatactaagtcagcagatgctgcaagtgagcctcttgcacaagaaagtcagacagagaga
acttgctgtgtctcagacatcagagcaagcgacaagaccctctgtgtgacccaggaagag
gagaggcttggtcaagaagaatcactgagttcaggatcaaagtttgaacaattcacttcc
ggcatcatcaacagattttgtttgaccgaagaagctgaacacaacaagaagtatgaggat
acctttttagaatctgaggaagtaagaaaaaaagtagaagttggggaaaggaaggagcat
ctgcatattgacatttcaaaagatggctctgaaatggatagctgctcacaaactgagaaa
gactctactgtgaagatacttcaagaagataccatcccacggacacaggtagaaaaaagg
aaaacaagcctgtatttttccagcaaatataacaaagaagcccttagtcccccgagacgc
aaggccttcaagaaatggacgcctcctcggtcaccgtttaatcttgtccaagaaacactt
tttcatgatccatggaaactcctcattgcgactatatttctcaatcgcacctcaggcaaa
atggcaatccctgtgctttgggagtttctggagaagtatccttctgcagaggtagcaaga
actgcagactggagagatgtttcagaacttcttaaacctcttggtctctacgatcaccga
gcaaaaacaattatcaagttttcagatgagtatctgacaaagcagtggaggtatccgatt
gagcttcatggaattggcaagtacggcaatgactcttaccgaattttttgtgtcaatgag
tggaagcaggtacaccctgaagaccataagttaaataagtatcatgactggctttgggaa
aatcatgaaaagttaagtctatcttaa
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