Sus scrofa (pig): 110258061
Help
Entry
110258061 CDS
T01009
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc01522
Endocrine resistance
ssc04330
Notch signaling pathway
ssc04658
Th1 and Th2 cell differentiation
ssc04919
Thyroid hormone signaling pathway
ssc05020
Prion disease
ssc05165
Human papillomavirus infection
ssc05200
Pathways in cancer
ssc05206
MicroRNAs in cancer
ssc05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110258061 (NOTCH1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
110258061 (NOTCH1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110258061 (NOTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110258061 (NOTCH1)
05206 MicroRNAs in cancer
110258061 (NOTCH1)
09162 Cancer: specific types
05224 Breast cancer
110258061 (NOTCH1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110258061 (NOTCH1)
09164 Neurodegenerative disease
05020 Prion disease
110258061 (NOTCH1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
110258061 (NOTCH1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
Gurken_M
cEGF
Motif
Other DBs
NCBI-GeneID:
110258061
NCBI-ProteinID:
XP_020936696
UniProt:
A0A287B1L8
LinkDB
All DBs
Position
Unknown
AA seq
2560 aa
AA seq
DB search
MPPLLAPLLCLALLPALAARGLRCSQPSEACLNGGKCEGLPNGTEACVCSGAFAGQRCQA
PNPCLSAPCKNAGTCHTLDRGGVVDYACTCRLGFSGPLCLTPRDNACLASPCLNGGTCDL
LTLTEFKCRCPPGWSGKTCQQADPCASNPCANGGQCLPFEASYICRCPPGFHGPTCRQDI
NECSQSPGPCQHGGTCHNELGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDT
THECACLPGFTGQNCEENIDDCPGNSCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDEC
QLMPNACQNGGTCHNTHGSYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRVASFYC
ECPHGRTGLLCHLSDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLG
ANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICM
PGYEGVHCEVNTDECASSPCLQNGRCLDKINEFQCECPTGFAGHLCQYDVDECASTPCKN
GAKCLDGPNAYTCVCTEGYTGPHCEVDIDECSPDPCHYGSCKDGVATFTCLCRPGYTGHH
CETNVNECHSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASNPCDSGTCLDKI
DGYECACEPGYTGSMCHINIDECADSPCHNGGTCEDGINGFTCRCPEGYHDPTCLSEVNE
CNSNPCIHGACRDSLNGYKCDCDPGWSGANCDVNNDECASNPCVNGGTCKDMTGGYVCTC
REGFSGPNCQTNVNECASSPCLNQGTCIDDVAGYTCNCLLPYTGTTCEVLLAPCAPGPCR
NGGECKESEDYESFSCACPSGWQGQTCEVDVNECVKSPCRSGASCQNTHGGYRCHCPAGY
TGRNCETDIDDCRPNPCHNGGSCTDGVNTAFCDCLPGFQGAFCEEDINECASNPCHNGAN
CTDCVDSYTCTCPTGFSGIHCENNTPDCTESSCFNGGTCVDGINSFTCLCPPGFTGSYCQ
HDVNECDSRPCLHGGTCHDSYGAYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGECWQAQT
LYRCECHSGWTGVYCDVPSVSCEVAAWQQGINVTHLCRNGGLCVNAGNTHHCHCQAGYTG
SYCEDQVDECSPSPCQNGATCTDYPGGYSCECVAGYHGVNCSEEVNECLSQPCRNGGTCI
DLTNTYKCSCPRGTQGVHCETNVDDCDPPIDPVSRGPKCFNNGTCVDQVGGYSCTCPPGF
VGERCEGDVNECLSNPCDPRGAQNCVQRVNDFHCECRAGHTGRRCESIINGCKDRPCKNG
GTCAVAANTARGFICKCPAGFEGATCENDARSCGSLRCLNGGTCISGPRSPTCLCLGPFT
GPECQFPASSPCVGGNPCYNQGSCEPTPESPFYRCLCPAKFNGLLCHILDYSFEGGVGLD
IPPPQIEEACELPGCREEAGNKVCSLQCNNHACGWDGGDCSLNFNDPWQNCTQSLQCWKY
FSNGHCDSQCNSAGCLFDGFDCQRAEGQCNPLYDQYCKDHFSDGHCDQGCNSAECEWDGL
DCAEHVPERLAAGTLVLVVLMPPEQLRNHSLHFLRELSRLLHTNVVFKRDASGQQMIFPY
YGREEELHKHPIRRSVAGGASLLPGGGGGAGSGRRRRELDPMDVRGSIVYLEIDNRQCVQ
SSSQCFQSATDVAAFLGALASLGSLNIPYKIEAVQSETVEPPPPPPLHFMYVAVVAFVLL
FFVGCGVLLSRKRRRQHGQLWFPEGFKVSEASKKKRREPLGEDSVGLKPLKNASDGALMD
DNQNEWGDEDLEAKKFRFEEPVVLPDLDDQTDHRQWTQQHLDAADLRVSAMAPTPPQGEA
DADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRT
GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD
LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVEAAVVL
LKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDVAQERMHH
DIVRLLDECSLVRSPPLHGAALAGAPTLSPPLCSPNGYLGNLKPAGQGKKARKPSTKGLA
CSGKEAKELRARRRKPQDGKGCLLDSSSALSPVDSLESPHGYLSDVASPPLLPSPFQQSP
SLPLNHLPGMPDAHLGVSHLSVAAKPEMAALGGGGRLAFEAGPPRLSHLPVASSTGTVLG
AGGGSGAVNFTVGGASGLNGQCEWLSRLQNGLVPSQYNPLRGSVAPSTLSTQAPALQHGA
MGPLHGGLSATALSQMMGYQALPGARLAAQPHLVQTQQQLQQVQQQNLQMQPPSMQPPQN
LQPPSMPPPPPQPNLPPQPHLGVSSATASHVGRSFLGGELSQADVQPLGPSSLAVHTVLP
QDSQVLPTALPPALAPPMTTTQFLTPPSQHSYSSSPVDNTPSHQLQVPEHPFLTPSPESP
DQWSSSSPHSNISDWSEGVSSPPTGVPPAQAAAHIPEAFK
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgctcctggcgcccctgctctgcctggcgctgctgcccgcgctcgccgcacga
ggcctgcggtgttcccagcccagcgaggcctgcctgaatggcgggaagtgcgaaggactc
cccaacggcacggaggcctgcgtctgcagcggagcctttgcaggacagcgatgccaggcc
cccaacccctgcctcagcgccccctgcaagaatgccgggacatgccacacgctggaccgc
ggcggtgtggtggactacgcctgcacctgccgcctgggcttctcagggccgctgtgcctg
acgccccgcgacaacgcctgcctcgccagcccctgcctcaatggtggcacctgtgacctg
cttacactcaccgagttcaagtgtcgctgccccccaggctggtcagggaagacttgccag
caggccgacccctgcgcctccaacccctgtgccaatggcggccagtgcctgcccttcgag
gcctcgtacatctgccgctgccctcccggcttccacggccccacctgcaggcaggacatc
aacgagtgcagccagagtcccgggccatgccaacacgggggcacctgccacaacgagctg
ggctcctaccgctgtgcctgccgcgccacccacaccggcccccactgcgagctgccctac
gtgccctgcagcccctccccctgccagaacgggggcacctgccgccccacgggggacacc
acccatgagtgcgcttgcctgccaggctttaccggccagaactgcgaggagaacattgac
gactgtcccggcaacagctgcaagaacggaggcgcctgcgtcgacggcgtgaacacttac
aactgccgctgcccgcccgagtggacaggtcagtactgcaccgaggacgtggacgagtgc
cagctcatgcccaacgcttgccagaacggcgggacctgccacaacacccacggcagctac
aactgcgtgtgcgtcaacggctggacgggcgaggactgcagcgaaaacatcgacgactgc
gccagtgccgcctgcttccacggcgccacctgccacgaccgcgttgcctccttctactgc
gagtgtccccacggccgcacaggtctgctgtgccacctcagtgacgcctgcatcagcaac
ccctgcaacgagggctccaactgtgacaccaaccccgtcaacggcaaggccatctgcacg
tgcccctcggggtacacggggccagcctgcagtcaggacgtggacgagtgctcgctgggc
gccaacccctgcgagcacgcaggcaagtgcatcaacacgctgggctccttcgagtgccag
tgtctgcagggctacactggcccgcgctgcgagatcgacgtgaacgagtgtgtgtcgaac
ccgtgtcagaacgacgccacctgcctggaccagatcggggagttccagtgcatctgcatg
ccgggctacgagggcgtgcactgcgaggtgaacacggacgagtgtgccagcagcccctgc
ctccagaacggccgctgcttggacaaaatcaacgagttccagtgcgagtgtcccacaggc
ttcgccgggcacctgtgccagtacgacgtggatgagtgtgccagcacgccctgcaagaac
ggcgccaagtgcctggatgggcccaacgcctacacctgcgtgtgcacagaaggctacacg
gggccccactgcgaggtggacatcgacgagtgcagccccgacccttgtcactacgggtcc
tgcaaggacggcgtcgccaccttcacctgcctgtgccggcccggctacaccggtcaccac
tgcgagaccaacgtcaatgagtgccacagccagccctgccgccacgggggcacctgccag
gaccgcgacaatgcctacctctgcttctgcctcaaggggaccacaggacccaactgtgag
atcaacctggacgactgtgccagcaacccctgtgactcgggcacctgtctggacaagatc
gacggctacgagtgtgcgtgtgagccgggctacacggggagcatgtgccacatcaacatt
gacgagtgcgcggacagcccctgccacaacggtggcacctgcgaggacggcatcaacggc
ttcacctgccgctgccccgagggctaccacgaccccacctgcctgtcggaggtcaacgag
tgcaacagcaacccctgtatccacggggcctgccgggacagcctcaacgggtacaagtgc
gactgcgaccccgggtggagtggcgcgaactgtgacgtcaacaacgacgagtgcgcgtca
aacccctgcgtcaacgggggcacctgcaaggacatgactggcggctacgtgtgcacctgc
cgcgaaggcttcagcggccccaactgccagaccaacgtcaacgagtgtgcgtccagcccc
tgcttgaaccagggcacgtgtatcgacgacgtggccggatacacgtgcaactgcctcctg
ccctacacaggaaccacgtgtgaggtgctgctggccccgtgtgcccccggaccctgcaga
aatggtggcgagtgcaaggagtccgaggactacgagagcttctcctgcgcctgcccctcg
ggctggcaggggcagacctgcgaggttgacgtcaacgagtgtgtgaagagcccgtgccgc
agcggcgcctcctgccagaacacgcacggaggctaccgctgccactgcccggcgggctac
acggggcgcaactgcgagacggacatcgacgactgtcggcccaacccgtgccacaacggg
ggctcctgcacagacggcgtcaacacggccttctgcgactgcctgcccggcttccagggt
gccttctgcgaggaggacatcaacgagtgtgccagcaacccctgccacaatggtgccaac
tgcaccgactgtgtggacagctacacctgcacctgccccacgggcttcagcgggatccac
tgtgagaacaacacgcccgactgcacggagagctcctgcttcaacggcggcacctgcgtg
gatggcatcaattcctttacctgcctgtgtccacctggcttcacgggcagctactgccag
catgacgtcaacgagtgtgactcgcggccctgcctgcacggtggcacctgccatgacagc
tatggcgcctacaagtgtacctgccctcagggctacactggcctcaactgccagaacctc
gtgcgctggtgcgactcgtcgccctgcaagaacggcggcgagtgctggcaggcccagacc
ctgtaccgctgcgagtgccacagcggctggaccggcgtctactgcgacgtgcccagcgtc
tcctgtgaggtggccgcctggcagcaaggcatcaatgttacccacctgtgccgaaacgga
gggctctgtgtgaacgcgggcaacacgcaccattgccactgccaggcgggctacacgggc
agctactgtgaggaccaggtagacgagtgctcgcccagcccgtgccagaacggggccacc
tgcaccgactaccccggcggctactcctgcgagtgcgtggctggctaccacggggtgaac
tgctccgaggaggtcaacgagtgcctgtcccagccctgccggaatggaggcacctgcatc
gacctcaccaacacctacaagtgctcctgcccccggggcacgcagggtgtgcactgtgag
accaacgtggacgactgcgacccccccatcgaccccgtctcccggggccccaagtgcttt
aacaacggcacctgcgtggaccaggtgggcggctacagctgcacctgcccgcctggcttc
gtgggcgagcgctgtgagggcgacgtcaacgagtgcctgtccaacccctgcgacccccgc
ggtgcccagaactgcgtgcagcgcgtcaacgacttccactgcgagtgccgcgctggccac
accgggcgccgctgcgagtccatcatcaacggctgcaaagacaggccctgcaagaatggg
ggcacctgcgccgtggccgccaacaccgcccgcgggttcatctgcaaatgcccggcaggc
ttcgagggcgccacgtgtgagaatgacgcgcgcagctgcggcagcctgcgatgcctgaac
ggcggcacctgcatctcgggcccccgcagccccacctgcctgtgcctgggccccttcacc
ggccccgagtgccagttcccggccagcagcccctgtgtgggcggcaacccctgctacaac
cagggcagctgcgagcccacgcctgagagccccttctaccgctgcctgtgccccgccaag
ttcaacgggctgctgtgccacatcctggactacagcttcgagggcggcgtgggcctcgac
atcccgccaccacagatcgaggaggcctgcgagctccccgggtgccgcgaggaggccggc
aacaaggtctgcagcctgcagtgcaacaaccacgcctgcggctgggacggcggcgactgc
tcgctcaacttcaacgacccctggcagaactgcacgcagtccctgcagtgctggaagtac
ttcagcaacggccactgcgacagccagtgcaactcggccggctgcctcttcgacggcttc
gactgccagcgcgcggaaggccagtgcaacccgctgtacgaccagtactgcaaggaccac
ttcagcgacgggcactgcgatcagggctgcaacagcgccgagtgcgagtgggacgggctg
gactgcgcggagcacgtgcccgagcggctggcggcgggcacgctggtgctggtggtgctg
atgccccccgagcagctgcgcaaccactccctgcactttctgcgcgagctcagccgcctg
ctgcacaccaacgtggtcttcaagcgcgacgccagcgggcagcagatgatctttccctac
tacggccgcgaggaggagctgcacaagcaccccatccggcgctccgtggccggcggggcc
tcgctgctcccgggcggcggcggcggcgcagggagcgggcggcggcgcagggagctggac
cccatggatgtccgcgggtccatcgtctacctggagattgacaaccggcagtgcgtccag
tcgtcctcgcagtgcttccagagcgccaccgacgtggccgccttcctgggcgcgctcgcc
tcgctgggcagcctcaacatcccctacaagatcgaggccgtgcagagtgagacggtggag
ccgcccccgcctccgccgctgcacttcatgtacgtggccgtggtcgccttcgtgctgctc
ttcttcgtgggctgcggcgtgctgctgtcccggaagcgccgacggcagcatggccagctc
tggttccccgagggcttcaaggtgtcggaggccagcaagaagaagcggcgggagcccctc
ggcgaggactcggtgggcctcaagcccctgaagaacgcctcggatggcgccctcatggac
gacaaccagaacgagtggggcgacgaggacctggaggccaaaaagttccggttcgaggag
cccgtggtcctccccgacctggacgaccagacggaccaccggcagtggacccagcagcac
ctggatgccgccgacctgcgtgtgtctgccatggcccccacgccaccccagggcgaggcc
gacgccgactgcatggacgtcaacgtccgagggcctgacggcttcacgcccctcatgatc
gcctcctgcagcggagggggcctggagaccggcaacagcgaggaggaggaggacgcgccg
gcggtcatctcagacttcatctaccagggcgccagcctgcacaaccagacggaccgcacc
ggcgagacggccctgcacctggccgcccgctactcgcgctccgacgcggccaagcgcctg
ctggaggccagcgccgacgccaacatccaggacaacatgggacgcaccccgctgcacgcg
gccgtgtccgccgacgcacagggtgtctttcagatcctgatccggaaccgagccaccgac
ctggacgcccgcatgcacgacggcacgacgccgctgatcctggccgcccgcctggccgtc
gagggcatgctggaggacctcattaactctcacgccgacgtcaacgccgtggacgacctg
ggcaagtccgccctgcactgggccgccgcggtcaacaatgtggaggccgccgtcgtgctg
ctgaagaacggggccaacaaggacatgcagaacaacaaggaagagacgcccctgttcctg
gccgcccgggagggcagctacgagacggccaaggtgctgctggaccacttcgccaaccgg
gacatcacggaccacatggaccgcctgcctcgcgacgtggcgcaggagcgcatgcaccac
gacatcgtgcggctgctggacgagtgcagcctggtgcgcagccccccgctacacggcgcc
gccctggccggcgcgcccaccctgtcccccccgctctgctcgcccaacggctacctgggc
aacctcaagccagccgggcagggcaagaaggcccgcaagcccagcaccaagggcctggcc
tgcagcggcaaggaggccaaggagctcagggcgcggaggcggaagccccaggacggcaag
ggctgcctgctggacagctcgagcgcgctgtcgcccgtggactccctggagtccccccac
ggctacctgtcggacgtggcctccccgcccctgctgccctcccctttccagcagtctccg
tctctgcctctcaaccacctgcccggcatgcctgatgcccacctgggcgtcagccacctg
agtgtggcggccaagcccgagatggcggcgctgggcggaggtggccggctggccttcgag
gctgggcccccacgcctctcccacctgccggtggcttccagcactggcacagtcctgggc
gccggtggaggcagcggggctgtgaatttcaccgtgggtggggcttcaggcttgaacggc
cagtgcgagtggctgtcccggctgcagaacggcctggtgccgagccagtacaacccgctg
cgagggagcgtggcacccagcaccctgagcacgcaggcccccgcgctccagcacggtgcc
atgggcccgctgcacggtggcctgtccgccaccgccctgtcccagatgatgggctaccag
gccctgcccggcgcgcggctggccgcccagcctcacctggtgcagacgcagcagcagctg
cagcaggtgcagcagcagaacttacagatgcagcccccaagcatgcagccgccgcagaac
ctgcagccgcccagcatgccgccaccgccgccgcagccaaacctgccaccgcagccacac
ctgggcgtgagctcggccaccgccagccacgtgggccggagcttccttgggggggagctg
agccaggccgacgtgcagccgctgggccccagcagcctggcggtgcacaccgtcctgccg
caggacagccaggtcctgcccacggcgctgccgcccgcgctggccccgcccatgaccacc
acgcagttcctgacgcccccctcccagcacagctactcctcctcgccggtggacaacacc
cccagccaccagctgcaggtgcccgagcaccccttcctcaccccgtcccccgagtccccc
gaccagtggtccagctcgtcgccgcattccaacatctccgactggtccgagggcgtctcc
agcccgcccaccggggtgcccccggcgcaggccgccgcccacatcccggaggccttcaag
taa
DBGET
integrated database retrieval system
