Sus scrofa (pig): 110258923
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Entry
110258923 CDS
T01009
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG8-like
KO
K18734
protein SMG8
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
110258923
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110258923
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
110258923
NCBI-ProteinID:
XP_020937868
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MAGPVSLRELLMGASAWTGAESPEGSPTEGGSSAAGGPEPPWREDEICVVGIFGKTALRL
NSEKFSLVNTVCDRQVFPLFRQEDPGDSGPGIRTEAGAVGEAGGAGDPGAGAGSGDPVRG
GVAAAEGNRTEPGSQDYSLLQAYYNQESKVLYLLLTSICDNSQLLRACRALQSGEAGGGL
SLPHAEAHEFWKHQEKLQCLSLLYLFSVCHILLLVHPTCSFDITYDRVFRALDGLRQKVL
PLLKTAIKDCPVGKDWKLNCRPCPPRLLFLFQLNGALKVEPPRNQDPAHPDKPKKHSPKR
RLQHALEDQIYRIFRKSRVLTNQSINCLFTVPANQAFVYIVPGSQEEDPVGMLLDQLRSH
CTVKDPESLLVPAPLSGXRRYQVMRQQSRQQLSFHIDTSSSSSSGQLVDFTLREFLWQHV
ELVLSKKGFDDSVGRNPQPSHFELPTYQKWISAASKLYEVAIDGKEEDLGSPTGELTSKI
LSSIKVLEGFLDIDTKFSENRCQKALPMAHSAYQSNLPHNYTMTVHKNQLAQALRVYSQH
ARGPAFHKYAMQLHEDCYKFWSNGHQLCEERSLTDQHCVHKFHSLPKSGEKPEADRNPPV
LYHNSRARSTGACNCGRKQAPRDDPFDIKAANYDFYQLLEEKCCGKLDHINFPVFEPSTP
DPAPAKNESSPAPPDADADKLKEKEPQTQGESTSLSLALSLGQSTDSLGTYPADPQAGGD
NPEVHGQGEVKTEKRPNLVDRQASTVEYLPGMLHSNCPKGLLPKFSSWSLVKLGPAKSYN
FHTGLDQQGFIPGTNYLMPWDIVIRTRAEDEGDLDTNSWPAPNKAIPGKRSAVVMGRGRR
RDDIARAFVGFEYEDSRGRRFMCSGPDKVMKVMGSGPKESALKALNSDMPLYILSSSQGR
GLKPHYAQLMRLFVVVPDAPLQIILMPQVQPGPPPCPVFYPEKQEITLPSDGLWVLRFPY
AYVTERGPCFPPKENVQLMSYKVLRGVLKAITQ
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcctgtcagcttgcgagagcttctgatgggcgcttcagcctggacaggcgct
gaaagtcccgaggggtcccctaccgagggcggtagcagcgcagctggcggaccagagcct
ccttggcgggaggatgagatctgcgtggtgggaatcttcggcaagacggctctgcgcctg
aattccgagaagttttcacttgtgaacacggtttgcgaccgacaagtctttcccctcttt
cgccaggaagatcctggagactcggggcctggaatcaggaccgaggctggggccgtcggg
gaggctggtggagccggggaccctggggcaggtgccggttccggggatccagttcgggga
ggtgtagctgccgcggaagggaatcgaactgagccaggttcccaagactacagcctcctg
caagcctattacaaccaggaaagcaaagttctgtatcttcttcttacttccatctgtgac
aattcccagcttctgcgggcttgccgggcccttcagagcggagaagcgggaggcggcctc
tctttacctcatgcagaagcgcacgagttctggaagcatcaagagaaattgcagtgcctc
agtctactttaccttttctccgtctgtcatatcctgcttctggtccatcccacttgttcc
tttgacatcacttatgatcgagtattcagagccctagatggactgcgacagaaagtactg
cccctcctcaaaacagccattaaggattgtccagttggcaaagactggaagctaaactgc
cgaccttgcccacctagactccttttcctctttcaactcaatggagcactcaaggtggaa
ccccctcggaaccaagacccagctcatccagacaagcccaagaagcattctcccaaaagg
agactgcagcatgccttggaggaccagatctatagaatcttccggaagagtcgtgtcttg
actaatcagagtatcaactgtctctttactgtgcctgccaatcaagcttttgtgtacata
gtgcctggaagccaggaggaggacccagtaggcatgttgctggaccaacttagaagtcat
tgtactgtgaaggaccctgaatctttgctggttcctgcacccctttctgggntcaggcga
taccaggtgatgaggcagcagagccgacaacagctttctttccacattgacaccagcagt
tccagttcttcagggcagctagtggatttcactcttcgggaattcctatggcagcatgta
gaactcgtcctaagcaagaaaggttttgatgacagtgtgggcagaaacccacagccttcc
cattttgaacttcctacttatcagaagtggatctcagcagcttcaaaactatatgaagta
gctattgatgggaaagaggaggacctgggatctcccactggggagctaacatctaaaatt
ttaagcagtattaaagtcttggaagggtttttggatattgacacaaaattctcagagaac
cggtgccaaaaagctttacccatggcccatagtgcttaccagtcaaatttgcctcataac
tacacaatgactgtccataagaaccagcttgcccaggctcttcgagtgtatagtcaacat
gctaggggtccagcctttcacaaatatgccatgcagttgcatgaggactgctacaagttt
tggagcaatggccatcagctctgtgaggagaggagtttaactgatcaacactgtgtgcat
aaatttcattcactacctaaatcaggagaaaagccagaggctgatagaaatcctcctgtg
ctatatcacaacagtcgagctcgatccactggtgcgtgtaactgtggaaggaaacaagca
cctcgagatgatccctttgatatcaaggcagctaactatgacttttatcagcttctggaa
gaaaaatgttgtggaaaactggatcatatcaatttcccagtatttgaaccaagtactcca
gatcctgctcctgccaaaaacgagtcatctcctgcccctccagatgcagatgccgataaa
cttaaagaaaaggagcctcaaacccaaggcgagagcacaagcttgagtttagctttgagt
ttaggccaatccacagatagtttaggtacttatccagctgatccacaagctggaggagac
aatccagaagttcatggtcaaggagaagtaaaaactgagaagagaccaaacttggttgat
cgacaggcatccacagttgaatatctcccaggcatgttacattcaaattgccccaaaggt
ctcctacccaaattctccagctggtctttggttaaactaggtcccgctaaatcttataat
tttcatactggtttggaccaacagggcttcattccaggaacaaactatcttatgccttgg
gacattgtcatcaggactagagctgaagacgaaggagacttagacacaaattcttggcct
gctccaaataaagctattcctggaaagagaagtgcagttgtaatgggaagagggagacgg
cgagatgacatagctcgagcatttgtgggctttgaatatgaagactctcgaggtcggagg
tttatgtgctcgggacctgacaaagtaatgaaagttatgggaagtgggcccaaggaatca
gctttaaaagccctgaatagtgatatgcccttatatatcctgtcatcatctcagggcaga
gggctaaaaccacattatgctcaacttatgaggctttttgttgtggttcctgatgctcct
ttgcagataatactcatgcctcaggttcaaccaggcccaccaccatgtccagtattctac
ccggaaaaacaagaaatcactctcccatctgatggcctctgggttttgagatttccttat
gcctatgtgactgagagaggaccttgtttccctccaaaggagaacgtgcaattgatgagt
tacaaggtgctccgtggggttcttaaagcaataacacaatga
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