Sus scrofa (pig): 110259740
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Entry
110259740 CDS
T01009
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
ssc05016
Huntington disease
ssc05017
Spinocerebellar ataxia
ssc05165
Human papillomavirus infection
ssc05166
Human T-cell leukemia virus 1 infection
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110259740 (TBP)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110259740 (TBP)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110259740 (TBP)
05165 Human papillomavirus infection
110259740 (TBP)
09164 Neurodegenerative disease
05016 Huntington disease
110259740 (TBP)
05017 Spinocerebellar ataxia
110259740 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
110259740 (TBP)
03021 Transcription machinery [BR:
ssc03021
]
110259740 (TBP)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
110259740 (TBP)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110259740 (TBP)
RNA polymerase III system
TFIIIB
110259740 (TBP)
RNA polymerase I system
SL1/TIF-1B
110259740 (TBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
VPS13_N
TFIIA
DDHD
EPL1
TMEM51
STAC2_u1
Tra1_central
DUF7518
Presenilin
PAT1
CLN3
Hid1
Tim54
SpoIIP
Motif
Other DBs
NCBI-GeneID:
110259740
NCBI-ProteinID:
XP_020941142
LinkDB
All DBs
Position
1:complement(5669..23675)
Genome browser
AA seq
269 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQQQQQQQQQQQQATVAAVQQSTSQQATQAASGQTPQLFHSQTLTTAPLP
GTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYN
PKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDF
KIQNMVGSCDVKFPIRLEGLVLTHQQFSR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaatagccttccaccttacgctcagggcctggcttcccctcagggtgcc
atgactcctggaatcccaatctttagtccaatgatgccttatggcacaggactgactcca
cagcctattcaaaacaccaacagtctatccattttggaggagcagcaaaggcagcagcag
cagcaacagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcagcagcaa
cagcagcaggcaacagtggcagccgtccagcagtcgacgtcccagcaggcgacccaggcg
gcctcgggccagactccacagctcttccactcacagactcttacgactgcacccttgcct
ggcaccactcccctgtatccctcccccatgacccccatgacccccatcacccctgccacg
ccagcatcggagagctctgggattgtgccacagctgcaaaatattgtatccacagtgaat
cttggttgtaaacttgacctaaagaccattgcacttcgtgcccgaaatgctgaatataat
cccaagcgatttgctgctgtaatcatgagaataagagaaccccggaccaccgcactgata
ttcagctctgggaaaatggtgtgcacgggagccaagagtgaagaacagtccagactagca
gcaagaaaatatgccagagttgtacagaagttgggttttccagctaaattcttggacttc
aagattcagaacatggtggggagctgtgatgtgaagttccctataaggttagaaggcctt
gtgcttacccaccaacagttcagtaggtaa
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