Sus scrofa (pig): 110260721
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Entry
110260721 CDS
T01009
Symbol
CASC1
Name
(RefSeq) protein CASC1 isoform X1
KO
K17580
cancer susceptibility candidate protein 1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
110260721 (CASC1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
110260721 (CASC1)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110260721 (CASC1)
Cilium and associated proteins [BR:
ssc03037
]
Motile cilia and associated proteins
Dynein arm
110260721 (CASC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Casc1_N
Casc1_C
Motif
Other DBs
NCBI-GeneID:
110260721
NCBI-ProteinID:
XP_020947847
LinkDB
All DBs
Position
5:48555637..48651370
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AA seq
732 aa
AA seq
DB search
MAPKPKKAGSKKKKITKAERLKQLQEEEERRQKEEEEARVKYAKEEMERLEKQRVEKEKW
RKLEAKDLERRNEELEELYLLEGCFPKAEKLKRDDRLLSQRKPSNIFILQWKHYIQCDGS
PDPSISQEINTFISLWKEETNETLEAVIAKSKLVLNLIGKLKLILLETPPYDLQEKNIIQ
YQGSILELQELLHLKFNMATELLLRQASTLADVDSGNMEKVIRDENVTLYVWANLKKNPR
YKSVTFSETQVGFEIPRILATSDIALRLLHTHYDHVTPLGPAPAASQEPTSTVTHLVKDE
AKGIEAAVSKVLQEESKQQENESNSVHEEETKVEEPGDAEEQKNSVQEEPEVKQHDLEMK
LLSETVLAAQLLLLENAQEKPRFFEDDEIDLCQFTTLGGVYHLDILELPPQYKSMKGWMI
VEILKEGLQKYVYPPETTEDFETENAFPPIEVMLEVHENVIFFEDPMVARWDAEAKHWKT
DGISNVSHKSEERLITFSLETFGPVTLIQDAHVNMPYQSWELRPLDVNKVLLTVTTVFME
IQIQIKENFCMLASIKLNNKKHYSILEEKWMTPISFILALKEAGLNIFPTRHSHFYVATN
YKLPLVEIKAYRQMALLSSAFAFGWSKWNAVCDSKKVVFQVREYLPKEEPIQNPNWTLLM
FSGDRAQSLRINENSEAFSEALKEETEFHSTLYHMVKDFASKEAMRYIRCSNCQFIDSVC
HMLLSTRLLSYS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaaccaaaaaaggctggcagtaagaaaaagaaaatcaccaaagctgaacgg
ttgaagcagctacaagaggaggaggagagacgacaaaaagaagaagaggaagcccgtgtg
aaatatgcaaaagaagaaatggaaagacttgaaaaacaacgtgttgagaaagaaaaatgg
cgaaaacttgaagcaaaagatctagaaaggagaaatgaagagcttgaagaactttattta
ttagaggggtgttttcctaaggcagagaaattgaaacgagatgatagattgctttctcag
cgcaaaccttcaaacatttttattctacagtggaaacactacattcaatgtgatgggagc
cctgatccttcaatatcccaagaaattaatacttttattagcttgtggaaagaggaaacc
aatgagaccttagaggcagtgattgcgaagagtaaactggtgctaaatttaattgggaaa
ttaaagctaattttattggaaactccaccatatgatttgcaagagaaaaatataatacag
taccaaggatcaattctagaactgcaggagctccttcatcttaaattcaacatggccaca
gaactacttctcagacaagcaagtactttagcagacgtggatagcggaaatatggaaaaa
gtcattcgagatgaaaatgttactctatatgtatgggcaaacctcaagaagaatccaagg
tacaaaagtgtcacattctctgagacacaagttggctttgaaatcccaaggatattagca
acatctgacattgctctacgactcctccacactcattatgatcatgtcacacccctgggc
cctgctccagcagcatcgcaagaacccacttccacggtgactcatttagtcaaagatgaa
gccaagggtatagaagcagcagtcagcaaagttctccaagaagagagtaaacaacaagaa
aatgagtctaactcagttcatgaggaagaaacaaaagttgaggaaccaggggacgctgaa
gaacaaaagaattctgtccaagaagaacccgaagtcaaacaacatgacctggagatgaaa
ttattaagtgaaactgttttagcagcccagttgttgctgctagagaatgctcaagaaaag
ccacgtttctttgaagatgatgagattgatttatgccaattcacaactctgggtggagtg
taccatttggatattttggagcttcccccacagtataaatcaatgaagggctggatgatt
gtggaaatactcaaagaaggattacagaaatatgtatatcctccagaaaccacagaagac
tttgaaacagaaaatgctttcccacccatagaggtcatgcttgaagttcatgagaatgtc
atcttttttgaggatcctatggttgcaaggtgggatgctgaagctaaacactggaaaact
gatggcatcagcaatgtctctcacaagtcagaagagagacttataaccttcagtctggaa
acttttggccctgttaccttgattcaagatgctcatgttaatatgccataccagtcatgg
gagctaagaccacttgatgtgaataaagtacttttgacggtgactacagtatttatggag
attcaaatacaaattaaggaaaacttctgcatgttagcttcaataaaactaaataacaaa
aagcattactctattttggaagaaaagtggatgactcctatttctttcattcttgctttg
aaagaagctggactgaatatcttccctaccagacactctcatttttatgttgctacaaac
tataagcttcctttggtagaaataaaagcttatcgacagatggccctgctgagttctgct
tttgcattcggctggagcaagtggaatgcagtatgtgattctaaaaaagttgtatttcag
gtgagggaataccttcccaaggaagaacccattcagaatcccaattggacacttttaatg
tttagcggtgacagggcacaaagtctcaggatcaacgaaaacagtgaggcattctctgag
gcccttaaagaagaaactgagtttcactccactttataccacatggttaaggattttgct
tctaaagaagcgatgaggtacattaggtgttccaactgccagtttattgactctgtgtgc
catatgcttctctctactagattactcagctattcctaa
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