Sus scrofa (pig): 110262040
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Entry
110262040 CDS
T01009
Symbol
NKX1-1
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
110262040 (NKX1-1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
110262040 (NKX1-1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
110262040
NCBI-ProteinID:
XP_020956548
UniProt:
A0A287AA71
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Position
8:complement(608327..611859)
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AA seq
444 aa
AA seq
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MSASGPAAPGDGPALPLPPPGPGPGPAPPAPAAAAAAARDAMDGRAELPAFPRAGAPPLA
ASDTVPAAPEGAGAARPGPPPRPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPAPC
APAPAAPGRPPRSEELERRALAAAGGAGAGPGAEPPHAGDPCKADEAEANGYSSGGGRSP
SADSGDEAPDDDDDDEAPEAGAARGAEARGGGSGLGARGSGSQGEAEAPPGAVDETAAPG
PRGNSPGASGPPGVVAAAAVAPAGGGTTPQGAAAATKPKRKRTGSDSKSGKPRRARTAFT
YEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADTSAPT
GGGGGPGPGAGPGAGLPGGLSPLSPSPPMGAPLAMHGPAGYPAHGPGGLVCAAQLPFLSS
PAVLSPFVLGSQTYGAPAFYAPHL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgagcggcccggcggctccgggggacggccccgcgctgccgctgccgccgcct
gggcccggcccggggcccgcaccgcccgcgcccgccgccgccgccgccgccgcccgggac
gccatggacgggcgcgccgagctgcccgccttcccccgcgccggagccccgccgctcgcc
gccagcgacactgtgcccgctgcacccgagggggctggggcggcccggcccggcccgccg
ccgcgccccacctccttctcggtgctggacatcctggaccccaacaagttcaacagcaga
agacgccgctgtgtgctgctgggccccgtggcgcccgcggcgtgcgccccggccccgtgc
gccccggcccccgctgccccgggacgcccgccgcgctcggaggagctggagcgccgcgcc
ctcgccgccgctggaggagctggagccggccccggagctgagccgccgcacgccggcgac
ccctgcaaggctgacgaggccgaggccaacggctacagcagcggcggcggccgcagcccg
agcgcggacagcggggacgaggcaccagacgacgacgacgacgacgaggcgcccgaggcg
ggggcggcgcgaggcgcggaggcgcgaggaggcggcagcggcctcggggcccgcgggtcg
ggcagccagggcgaggccgaggcgccccccggcgccgtcgacgagacggcggcccccggc
ccccgcgggaactctcccggagcctcgggcccgccgggggtcgtggcggcggcggcagtg
gcgccggcgggcggggggaccaccccgcagggggcggcggcggcgaccaagcccaagcgg
aagcgcacgggctccgactccaagtccgggaagcctcggcgcgcgcgcaccgccttcacc
tacgagcagctcgtggcgctggagaacaagttcaaggcgacgcgctacctgtcggtttgc
gagcgcctcaacctggcgctgtcgctgagcctcaccgagacgcaggtgaagatctggttc
cagaaccgccgcaccaagtggaagaagcagaaccccggcgccgacacgagcgcgccgacc
ggcggcggcggagggccggggccgggcgcggggccgggcgcggggctgcccggcggcctc
agcccgctcagcccgtcgccgcccatgggcgcgccgctcgccatgcacggcccggccggg
tacccggcgcacggccccggcggcctggtgtgcgccgcacagctgcccttcctgtcgagc
cccgcggtgctgtcgccctttgtgctgggctcgcagacctacggcgcgcccgccttctac
gcgccgcacctctga
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