Sus scrofa (pig): 110262155
Help
Entry
110262155 CDS
T01009
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
110262155 (PCDH18)
Cell adhesion molecules [BR:
ssc04515
]
Cadherins
Protocadherins
110262155 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
BBS1
TMEM154
PAH
Syndecan
MPS-4
Cadherin_C_2
PepSY
DUF3418
Motif
Other DBs
NCBI-GeneID:
110262155
NCBI-ProteinID:
XP_020957247
LinkDB
All DBs
Position
8:89321487..89335406
Genome browser
AA seq
1135 aa
AA seq
DB search
MYQMNAKMHFRFVFALLVVSFNSDALGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PLTVRFRAMQRGNSPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELRLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININFMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGPNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTVLESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSIIAGNEENIFVMDPRSCDIHTNVSMESVPYTEWELSIVIQD
KGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQ
QHPHQSLEDDTQPADSSEKKKSFSTFGKDSPNDEDSGDTSTSSLLSEMSSVFQRLLPPSL
DTYAECSEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPANNSGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaaatgaatgctaaaatgcactttagatttgtgtttgcactcctggttgtatct
ttcaactccgatgcactgggcaagaatttgaaatacaggatttatgaggagcagagggtt
ggatcagtaattgcaagactatcagaggatgtggctgatgttttagttaagctgcctaat
cctttgactgttcgttttcgagccatgcaaaggggaaattctcctttactcgtagtaaat
gaggataacggggaaatcagcataggggcaaaaattgaccgtgaacaactgtgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccactgagcatctgcagctt
ttccatattgaagtcgaagtgctggatattaatgacaattctccccagttttcaagatct
ctcataccgattgagatatcagagagtgcggcagttgggactcgtatccccctggacagt
gcttttgatccagatgttggagaaaattccctccatacgtactctctctccgccaatgat
ttttttaatatcgaggtccggaccaggactgatggagctaagtatgcagaactcatagtg
gtgagagagctggaccgggaactaaagtcaagctatgagcttcggctcaccgcctcggac
atgggggtccctcagaggtctggctcatccatactaaaaatcagcatttcagactctaat
gacaacagccctgctttcgagcagcagtcttatataatacaactcttagaaaactctccc
gttggcactttgctcctagatctgaatgccactgatccagatgagggcgccaatgggaaa
attgtctattccttcagcagtcatgtgtctcccaaaattatagagacttttaagattgat
tcagaaagaggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctat
gaaattgatgttcaggctcaagatttgggtccaaattcaatcccggctcactgcaagatt
ataattaaggttgtggatgtgaacgacaataaacctgagattaacataaacttcatgtcc
cctggaaaagaagaaatatcttatatttttgaaggggatcctattgacacatttgttgcc
ttggttagagttcaggacaaggattctgggccaaatggagaaatagtttgtaagcttcat
ggacatggtcactttaaacttcagaagacgtatgaaaacaattatttaatcttgacgaat
gccacactggatagagaaaagagatctgagtacagtttgactgtaatcgcggaggacaag
gggacacccagtctctctacagtaaaacattttactgttcaaatcaatgatataaacgac
aatccacctcacttccagagaagtcgatatgaatttgcaatctcagagaataactcgcca
ggggcatatatcactactgttacagccacagatcctgatcttggagaaaatgggcaagtt
acatataccgttttggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatctaatggagccatctatgccctcagaatctttgatcatgaggaagtgagtcag
atcacttttgtggtcgaagcaagagatggtggaagtccaaagcaacttgtaagcaacacc
acagttgtgcttaccatcattgatgaaaatgacaatgtccctgtggttatagggcctgca
ctacgcaataatactgcagaaatctccatccccaaaggggccgaaagcggctttcatgtc
acaagaataagggcaattgacagagactccggtgtgaatgctgaactcagctgctccatc
atagcaggcaatgaggagaatatctttgtaatggatccacgatcatgtgacatccatacc
aacgtaagcatggaatctgttccctatacagaatgggagctctcaattgtcatccaggac
aaaggcaatcctcagctgcataccaaagtccttctgaagtgtatgatctttgaatatgca
gagtcagtgacaagtacagcaatgacctcagtaagccaagcatccttggatgtctccatg
attatcattatttccttaggagcaatttgtgcagtgttgttggttattatggtgctgttt
gcaactaggtgtaaccgagaaaagaaagacactagatcctacaactgcagggtagcagaa
tcaacttaccagcaccacccaaagagaccctccaggcagatccacaaaggggatatcacg
ctggtgcctacagtaaatggcactctgcccatcagatctcatcacaggtcatctccgtct
tcatctcctaccttagaaagagggcagatgggcagccggcagagtcacaacagtcaccag
tccctcaacagtttggtgacaatctcttccaaccatgtgccagagaacttctcattagag
ctcacccacgccacccctgctgttgagcaggtctcccagcttctttcaatgcttcaccag
ggacaatatcagccaaggccaagttttcgaggaaacaaatattccaggagctatagatat
gcccttcaagatatggacaaatttagcttgaaagacagtggccgtggggacagtgaagca
ggagacagtgattatgatctgggacgagattctccaatagacaggctgctgggtgaaggg
ttcagtgacctgtttcttacagatggaagaattccagcagctatgaggctgtgcacagaa
gagtgcagggtcctgggacactccgaccagtgctggatgcccccactgccctcgccttcc
tctgattataggagtaacatgttcattccgggagaagaattcccagcacagccccagcag
cagcatcctcaccaaagtcttgaggatgacacgcagcccgcagattctagtgagaagaag
aagagtttttccacttttgggaaggactccccgaacgatgaggactctggggacaccagc
acgtcctctctgctctcggaaatgagcagtgtgttccagcgcctcttacccccttccctg
gacacttatgctgagtgcagtgaaatggatcggtccaactccctggaacgccgaaaggga
cctttgccagccaagaccgtgggttacccacaaggggtggcggcctgggcagccagtacg
cattttcaaaatcccgccaacaactctgggcccccacttggaactcactctagtgtgcag
ccgtcttcgaaatggttgcccgccatggaggagatccctgaaaattatgaagaagatgat
tttgacaatgtgctcaaccacctcaatgacggcaaacatgaactcatggatgccagtgag
ctggtggctgaaattaacaaactgcttcaagatgtccgccagagctag
DBGET
integrated database retrieval system
