Sus scrofa (pig): 396584
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Entry
396584 CDS
T01009
Symbol
SPAST
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
396584 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
396584 (SPAST)
Enzymes [BR:
ssc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
396584 (SPAST)
Membrane trafficking [BR:
ssc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
396584 (SPAST)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
396584 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
AAA_14
TIP49
AAA_16
Mg_chelatase
AAA_24
DUF815
IstB_IS21
nSTAND3
AAA_2
MIT
NPHP3_N
CEND1
Motif
Other DBs
NCBI-GeneID:
396584
NCBI-ProteinID:
NP_998914
Ensembl:
ENSSSCG00000008517
ENSSSCG00000023816
UniProt:
Q719N1
A0A8D0LXS3
LinkDB
All DBs
Position
3:complement(107439810..107508915)
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AA seq
530 aa
AA seq
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MAAKRSSRAAPAPASASPPAPVPGGEVERVRAFHKQAFEYISVALRIDEDEKVGQKEQAV
EWYKKGIEELEKGIAVVVTGQGEQCERARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSK
SQMDVYNDSTNLTCRNGHLQSESGAVPKRKDPLTHPSNSLPRSKAIMKTGSTGLSGHHRA
PSCSGLSIVSGMRQGPGPTTATHKSTPKTNRTNKPSTPTTAPRKKKDLKNFRNVDSNLAN
FIMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGN
GKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL
LRERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYV
SLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIRELKP
EQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaagaggagctcccgggctgcgccggccccggcctcggcctcgcccccggcg
ccggtgccaggcggggaggtcgaacgagtacgagccttccacaaacaggccttcgagtac
atctccgttgccctgcgcatcgacgaggacgagaaagtaggacaaaaggagcaagctgtg
gaatggtataagaaaggtattgaagaactagaaaaaggaattgccgttgtagttacagga
caaggtgaacagtgtgaaagagccagacgccttcaagctaaaatgatgactaatttggtt
atggcaaaggaccgtttacagctattagagaagctgcaaccagttttgcaattttccaag
tcacagatggacgtctataatgatagtactaacttgacatgccgcaacggacatctccag
tcagaaagtggagctgttcctaaaagaaaagaccccttaacacaccctagtaattcactg
cctcgttcaaaagcgattatgaaaactggatccacaggtctttcaggccaccacagagca
cctagctgcagcggtttatccattgtttctggaatgagacaggggcctggtcctacaact
gccactcataagagtacaccaaaaacaaatagaacaaataaaccttccactcctacaact
gctccccgtaaaaagaaagacttgaagaattttaggaatgtggacagcaaccttgctaac
tttataatgaacgaaattgtggacaatggaacagctgttaaatttgatgatatagctggt
caagaattggcaaaacaagcattgcaagaaattgtcattcttccttctctgaggcctgag
ttgttcacaggtcttagagctcctgccagaggattgttactctttggtccacctggaaat
gggaaaacaatgctggctaaagcagtagctgcagaatctaatgcaaccttctttaatata
agtgctgcaagtctaacttcaaaatatgtaggagaaggagaaaaattggtgagagctctt
tttgctgtggctcgagaacttcagccttctataatttttatagatgaagttgatagcctt
ttgcgtgaaagaagagaaggagaacatgatgccagtagacgtctaaaaactgaattttta
atagaatttgatggtgtacaatctgctggagatgacagagtgcttgtaatgggtgcaact
aacaggccacaagagcttgatgaggctgttctcaggcgtttcatcaaacgggtatatgtg
tctttgccaaatgaggagacacgactacttttattaaaaaatctattatgtaaacaagga
agcccactgacccaaaaggaactggcacaacttgctagattgaccgacggatactcagga
agtgatctaacagctttggcaaaagatgcagccctgggtcctatccgagaactgaaacca
gaacaagtgaagaatatgtctgccagtgagatgagaaatattcgattatctgacttcact
gaatccttaaaaaagataaaacgcagcgtgagccctcagaccttagaagcatacatacgt
tggaacaaggactttggagacaccactgtttaa
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