Sus scrofa (pig): 396707
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Entry
396707 CDS
T01009
Symbol
LAMB1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04151
PI3K-Akt signaling pathway
ssc04510
Focal adhesion
ssc04512
ECM-receptor interaction
ssc05145
Toxoplasmosis
ssc05146
Amoebiasis
ssc05165
Human papillomavirus infection
ssc05200
Pathways in cancer
ssc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
396707 (LAMB1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
396707 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
396707 (LAMB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
396707 (LAMB1)
09162 Cancer: specific types
05222 Small cell lung cancer
396707 (LAMB1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
396707 (LAMB1)
09174 Infectious disease: parasitic
05146 Amoebiasis
396707 (LAMB1)
05145 Toxoplasmosis
396707 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
396707
NCBI-ProteinID:
XP_003130317
Ensembl:
ENSSSCG00000015444
UniProt:
A0A8D1XZJ0
LinkDB
All DBs
Position
9:complement(107670120..107747242)
Genome browser
AA seq
1786 aa
AA seq
DB search
MGRLQVFALSFLALCGAQVSAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGRTWGVYRYFAYDCESSFPGIPTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFRIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMC
RHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLATGNVSGG
VCDDCQHNTMGRNCERCKPFYYQHPERDVRDPNLCEPCTCDPAGSQNXGICDGYTDFSAG
LIAGQCRCKLHVEGEHCDICKEGFYGLTAEDPFGCKSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSAESGQCLCRPHMIGRQC
NEVESGFYFTTLDHYIYEAEEANFGPGVSIVERQYVQDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSPG
SRYVVLPRPVCFEKGVNYTVRLELPQYTSSDSSVDSPYTLIDSLVLMPFCKSLDIFTVGS
SGDGVVTNSAWEMFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGS
LSSVCDPNGGQCQCRPNVVGRKCDRCAPGTFGFGPNGCKPCECHLQGSVNAFCDPVTGQC
HCFQGVYARQCDRCLPGYWGFPSCQPCQCNGHAEDCDSVTGECSSCQDYTTGHNCERCLA
GYYGDAIIGSGDHCRPCPCPDGPESGRQFASSCYQDPVTLQLACVCNPGYIGSRCEDCAA
GFFGNPSEVGGTCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGVHCQLCRLGYYGDA
LQQDCRKCVCNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGTG
CEPCNCDAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPSVECRACDCDPRGIE
TPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIAELTNRTQKF
LEKAKALKISGVIGPYRETVDSVEKKVNEIRDILAQSPAAEPLKNIGNLFEEAEKLTKDV
TEKMAQVEGKLSDAALQSNSTARELDSLQAEAESLENTVKELAEQLEFIKNSDIRGALDS
ITKYFQMSLEAEERVNASTTDSNSTVEQSALIRDRVEDLMLEQESQFRDKQEEQARLLDE
LAGKLQSLDLSTAAELTCGTPPGASCSETECGGPNCRTDEGQKKCGGPGCGGLVTVAHSA
WQKAMDFDQDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKANATKEKVDKSNEDL
RNLIKQIRDFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVI
LQQSAADIARAELLLEEAQRASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDI
QGTQNLLTSIESETAASEETLFNASQRISELERNVEELKRKAAQNSGEAEYIEKVVYAVK
QSADDVKKTLDGELEEKYKKVENLIAQKTEESADARRKAEMLQNEAKTLLAQANSKLQLL
KDLERKYEDNQKYLEDKAQELVRLEGEVRSLLKDISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctccaggtgttcgcgctgagtttcctagccctatgcggagcccaagtgagc
gctcaagaacccgagttcagctacggctgcgcggagggcagctgctacccggccaccggc
gaccttctcatcggccgagcgcagaagctctcggtgacctcgacctgcgggcttcacaag
ccggagccatactgcatcgtcagccacctgcaggaggacaaaaaatgcttcatatgcaac
tcgcaagatccttatcatgaaacccttaatcctgacagtcatctcattgaaaatgtggtc
accacatttgctccaaaccgcctgaagatttggtggcaatccgaaaatggtgtggaaaat
gtaacgattcagttggatttggaagcagaattccattttactcatctcataatgaccttc
aagacattccgtccagccgctatgctgatagaacgatcgtccgactttggaagaacctgg
ggtgtgtacagatactttgcctatgactgtgagagctcatttcccggcattcccactggc
cccatgaagaaagtcgatgatatcatttgtgattcccgatattctgacattgaaccctcg
acggaaggagaggtgatatttcgtgctttagatcctgctttcagaatagaagacccttac
agtccaaggatacagaatctcttaaaaatcaccaatttgagaatcaagtttgtgaaacta
catactttgggagataaccttttggattccagaatggaaatcagagaaaaatactattat
gcggtttacgatatggtggttcgaggaaactgcttctgctatggccatgccagtgagtgt
gcccctgtggatggattcaacgaagaagtagagggaatggttcatggccactgcatgtgc
aggcataataccaagggcttaaactgtgaactctgcatggatttctaccatgatttacct
tggaggcctgctgaaggtcgaaacagcaacgcatgtaaaaagtgcaactgcaacgaacat
tccagctcgtgccacttcgacatggcggtttacttggccaccggcaatgtcagcggaggg
gtgtgtgatgactgtcagcacaacaccatggggcgcaactgtgagcgctgcaaaccgttc
tactaccagcacccagagagggacgttcgggatcctaacctctgtgaaccatgtacctgt
gaccccgctggctctcagaatnggggcatctgtgacggttacacggacttttctgccggt
ctcattgctggccagtgtcgatgtaaattacacgtggaaggggaacattgtgacatctgc
aaagaaggcttctatggtttaaccgctgaagatccatttggctgtaaatcttgcgcttgc
aatcctctgggaacaatcccgggtgggaatccttgtgattctgagaccggttactgctac
tgtaagcgtctggtgacaggacagcattgtgaccagtgtctgccagagcactggggctta
agcaacgatctggatggatgtcgaccttgtgactgtgaccttgggggagccttaaacaat
agttgctctgcagagtcaggccagtgcctgtgccgaccccacatgatcggacgtcagtgc
aacgaggtggaatccgggttctacttcaccaccttggaccactacatctatgaagccgaa
gaagccaactttggacctggggtcagcattgtggaacggcagtatgtccaggaccggatt
ccctcctggactggtgcgggtttcgtccgagtgcctgaaggggcgtatttggaattcttc
attgataacataccgtattccatggagtacgacatcctcattcgctatgagccacagctc
cctgaccactgggagaaagctgtcatcacggtgcagcgacctgggaagattccaaccagc
agccggtgtggaaacactgttcccgatgatgacaaccaggttgtgtccctatcgcctggc
tccaggtatgtggtcctcccccgcccggtgtgcttcgagaagggtgtgaactacacagtg
cggttagaactgccccagtatacttcctccgacagcagtgtggacagtccctacacgctg
atcgattctcttgttctcatgccgttctgtaagtcactggacattttcaccgtgggcagc
tcaggagatggggtggtcaccaacagtgcctgggaaatgtttcagagataccgatgtctg
gagaacagtagaagtgtcgtgaagacaccaatgaccgacgtttgccgaaacatcatcttt
agcatttccgccctgttacaccagacaggcctggcttgtgaatgcgaccctcagggctca
ctgagttctgtctgtgaccccaatggaggccagtgccagtgccggccgaacgtggttgga
agaaagtgcgaccggtgtgcccctggcacctttggcttcggccccaatggatgcaaaccc
tgtgagtgccatctgcaaggatctgtcaatgctttctgcgatcccgtcactggccagtgc
cactgtttccagggggtgtatgcgaggcaatgtgaccggtgtttacctgggtactggggc
tttccaagttgccagccctgccagtgcaatggccacgcggaggactgcgactcagtgaca
ggggaatgctcgagctgccaggactacaccacgggtcataactgtgaaaggtgcttggcc
ggttactatggagatgccatcattgggtcaggagatcactgccgcccttgtccttgccca
gatggtcccgagagtggacgccagtttgccagtagctgttaccaagaccctgttactttg
cagcttgcctgcgtctgtaatcctggatatattggctccagatgcgaggactgtgctgca
ggcttcttcggcaatccctcagaggtgggggggacgtgtcagccttgccagtgtcaccac
aacattgacacgacggacccggaagcctgtgacaaggagactgggaggtgcctcaagtgc
ctataccacaccgagggggtgcactgccagctctgccgacttggttactatggcgacgct
ctccagcaggactgtcgaaagtgtgtctgcaattacctgggcaccgtgcaggagcattgt
aacggctctgactgccaatgtgacaaaaccaccgggcagtgcttgtgtctccctaacgtg
atcggccagaactgtgaccgctgtgcgcccaacacctggcagctggccagcgggacaggg
tgtgagccatgcaactgcgatgctgctcattcctttgggccttcttgtaatgagttcaca
gggcagtgccagtgcatgcctggcttcggaggccgcacctgcagcgagtgccaggagctc
ttctggggagaccccagcgtggagtgccgagcctgtgactgcgaccccaggggcatcgag
acgccgcagtgtgaccagtccaccggccagtgtgtctgcgtcgagggtgtggagggtccc
cgctgcgacaagtgcactcgagggtactcgggggtcttccccgactgcacgccctgccac
cagtgctttgccctttgggatgtgatcatcgctgagctgaccaacaggacccagaagttc
ctggagaaggccaaggccttgaagatcagtggtgtgatcgggccttaccgggagactgtg
gactcagtggagaagaaagtcaacgagatcagagacatcctggcccagagcccggccgca
gagccgctgaagaacatcgggaatctctttgaggaagcggagaaactgaccaaagatgtt
acagaaaagatggctcaagtagaaggaaaattatctgacgcagctttgcaaagcaacagc
acagcaagagaactggattctctacaggcagaagctgaaagcctagaaaacacagtgaaa
gagcttgctgaacaactggaatttatcaaaaactcagatattcggggcgccttggacagc
attaccaagtatttccagatgtctctggaggcagaggagagggtgaatgcttccaccacg
gattccaacagcactgtggagcagtcggccctcattcgagacagagtggaagacttgatg
ttggagcaagagtcccagttcagggacaaacaggaggagcaggcccgccttctggatgaa
ctggcaggcaaactacagagtctggacctttcaactgctgctgagctgacgtgtggaacg
cctccaggggcctcctgttccgagacagagtgtggcggcccaaactgcagaactgacgaa
ggacagaagaagtgtggggggcctggctgtggtgggctggtcaccgtcgcacacagcgcc
tggcagaaagccatggactttgaccaagatgtcctgagtgccttggctgaggtggaacag
ctctccaagatggtctctgaagcaaaactgagagcagatgaagcaaaacagaatgctcaa
gatgttctgttgaaagccaatgctaccaaagaaaaagtggacaagagcaatgaggacttg
agaaatctgatcaagcaaatcagggactttttgacccaggacagtgctgatctggacagt
attgaagcagttgctaacgaagtattgaaaatggaaatgcctagcaccccacagcagtta
cagaacttgacagaagatattcgtgaacgagttgaaagcctttctcaagtagaggttatt
ctacagcaaagtgctgctgacattgccagagctgagctgctgttagaagaagctcaaaga
gccagcaaaagtgcgacagatgttaaagtcactgcagacatggtaaaggaagctctggaa
gaagcagaaaaggcccagattgccgcagaaaaggccattaaacaggcagatgaagacatc
caaggaacccaaaacctgctaacatcgattgaatctgaaacagcagcttctgaggaaacc
ttgtttaacgcctcccaacgcatcagcgagctagagaggaatgtggaagaacttaagcgg
aaggctgcccaaaactctggggaggcagaatatattgaaaaagtagtatatgctgtgaaa
caaagtgcagatgatgttaagaagactctggatggtgaacttgaggaaaagtataagaaa
gtagaaaatttaatagcccaaaaaacagaagagtcagctgatgccagaaggaaagctgaa
atgctacaaaacgaagcaaaaacacttctggctcaagcaaacagcaagctgcaactcctg
aaagatttagaaagaaaatatgaggacaatcaaaaatatttagaagataaagctcaagaa
ttagtaagattggaaggagaagtccgttcactcctaaaggatataagccagaaagttgct
gtttacagcacctgcttgtaa
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integrated database retrieval system
