KEGG   Sus scrofa (pig): 396725
Entry
396725            CDS       T01009                                 
Symbol
DES
Name
(RefSeq) desmin
  KO
K07610  desmin
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04519  Cadherin signaling
ssc04820  Cytoskeleton in muscle cells
ssc05410  Hypertrophic cardiomyopathy
ssc05412  Arrhythmogenic right ventricular cardiomyopathy
ssc05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    396725 (DES)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    396725 (DES)
 09160 Human Diseases
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    396725 (DES)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    396725 (DES)
   05414 Dilated cardiomyopathy
    396725 (DES)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    396725 (DES)
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     396725 (DES)
SSDB
Motif
Pfam: Filament Filament_head ZK652 DUF7491 DUF8429 KIF21A_4th CCDC89 GAS CCDC57_N APG6_N Phage_scaffold Baculo_PEP_C SPC25_N PPi_PEPCK_C CEP135_TSGA10_CC COLEC12 DUF1664 Trimer_CC CLIP1 ANG-1 ATG17_like MHC_I_3 FKBP15 Golgin_A5 Ninein_long_CC CEP89 YGR130C_N
Other DBs
NCBI-GeneID: 396725
NCBI-ProteinID: NP_001001535
Ensembl: ENSSSCG00000020785
UniProt: P02540
LinkDB
Position
15:121428539..121435426
AA seq 471 aa
MSQAYSSSQRVSSYRRTFGGAPSFPLGSPLSSPVFPRAGFGTKGSSSSVTSRVYQVSRTS
GGAGGLGPLRASRLGATRVPSSSYGAGELLDFSLADAVNQEFLTTRTNEKVELQELNDRF
ANYIEKVRFLEQQNAALAAEVNRLKGREPTRVAEIYEEELRELRRQVEVLTNQRARVDVE
RDNLLDDLQRLKAKLQEEIQLKEEAENNLAAFRADVDAATLARIDLERRIESLNEEIAFL
KKVHEEEIRELQAQLQEQQVQVEMDMSKPDLTAALRDIRAQYETIAAKNISEAEEWYKSK
VSDLTQAANKNNDALRQAKQEMMEYRHQIQSYTCEIDALKGTNDSLMRQMRELEDRFASE
ASGYQDNIARLEEEIRHLKDEMARHLREYQDLLNVKMALDVEIATYRKLLEGEESRINLP
IQTFSALNFRETSPEQRGSEVHTKKTVMIKTIETRDGEVVSEATQQQHEVL
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgagccaggcctactcgtccagccagcgcgtgtcctcttaccgccgcaccttcggcggg
gccccgagcttcccgctcggctcgccgctgagctcgcccgtgttcccgcgcgcgggcttc
ggcaccaagggctcctcgagctcggtgacctcccgagtgtaccaggtgtcgcgcacgtcg
ggcggggccgggggcctggggccgctgcgggccagccggctgggggccacccgcgtgccc
tcctcatcctacggcgcaggcgagctgctggacttctcgctggcagacgccgtcaaccag
gagttcctgaccacgcgcaccaacgagaaagtggagctgcaggagctcaatgatcgcttt
gccaactacatcgagaaggtgcgcttcctggagcagcagaacgcggcgctcgccgccgag
gtgaaccggctcaagggccgcgagccgacccgggtggccgagatctacgaggaggagctg
cgcgagctgcggcgccaggtggaggtgctcaccaaccagcgcgcccgcgtcgacgtcgag
cgggacaacctgctggacgacctgcagcggctcaaggccaagctgcaagaggaaattcag
ctgaaagaagaagccgagaacaatttggctgccttccgagcggatgtggatgcagccact
ctagctcgaattgacctggagcgcaggatcgaatctctcaacgaggaaatcgcgttcctt
aagaaagtacacgaagaggagatccgagaactgcaggcccagcttcaggaacaacaggtc
caggtggagatggacatgtccaagccagacctcaccgccgccctcagggacatccgggct
cagtacgagaccatcgcggctaagaacatctcggaagccgaagagtggtacaagtcaaag
gtgtccgacctgacccaggcagccaataagaacaatgatgcactgcgccaggccaagcag
gagatgatggagtatcgccatcagatccagtcctacacctgcgagatcgatgccctcaag
ggcactaacgattccctgatgaggcagatgcgggagctggaggaccgctttgctagtgag
gccagcggctaccaggacaacatcgcacgcctggaggaggagatccgacacctcaaggat
gagatggcccgccacctgcgcgagtaccaggacctgctcaatgtcaagatggccctggat
gtggagattgccacctaccggaagctgctggagggcgaggagagccggatcaacctccct
atccagaccttctctgccctcaacttccgagaaacaagccctgagcaaaggggttctgag
gtccataccaagaagacagtgatgatcaagaccatcgagacccgggatggggaggtcgtc
agtgaggccacacagcagcaacacgaggtgctctaa

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