Sus scrofa (pig): 396910
Help
Entry
396910 CDS
T01009
Symbol
ABCB1
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc02010
ABC transporters
ssc04976
Bile secretion
ssc05206
MicroRNAs in cancer
ssc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
396910 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
396910 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
396910 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
396910 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssc02000
]
396910 (ABCB1)
04147 Exosome [BR:
ssc04147
]
396910 (ABCB1)
04090 CD molecules [BR:
ssc04090
]
396910 (ABCB1)
Enzymes [BR:
ssc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
396910 (ABCB1)
Transporters [BR:
ssc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
396910 (ABCB1)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
396910 (ABCB1)
CD molecules [BR:
ssc04090
]
Proteins
396910 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA
G-alpha
AAA_29
SbcC_Walker_B
AAA_7
PRK
AAA_15
DUF815
APS_kinase
nSTAND1
NTPase_1
DUF2207_C
NEMP
Motif
Other DBs
NCBI-GeneID:
396910
NCBI-ProteinID:
NP_001295175
Ensembl:
ENSSSCG00000015390
Vega:
OTTSUSG00000002311
UniProt:
A0A0E3MY68
LinkDB
All DBs
Position
9:93049955..93146469
Genome browser
AA seq
1286 aa
AA seq
DB search
MDLEEGRIERAGKKNFLKRDKKSKNDKKEKKPAVSVFAMFRYSNWLDRLYMLLGTTAAII
HGAGLPLMMLVFGEMTDSFASIGNMGNLTFPNMIYANCVNCPDNSTTLEEKMTVYAYYYC
GIGAGVLVAAYIQVSFWCLAAGRQIHKIRKQFFHAIMRQEIGWFDVHDVGELNTRLTDDV
SKINEGVGDKIGMFFQSIATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAIWAKILSSF
TDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISI
GAAFLLIYASYALAFWYGTTLVLSNEYTIGQVLTVFFSVLIGAFSVGQASPSIEAFANAR
GAAYEIFKIIDSKPSIDSYSKNGHKPDNIKGNLEFRNVHFSYPSRNEVKILKGLNLKVES
GQTVALVGNSGCGKSTTVQLMQRLYDPTEGVVSIDGQDIRTINVRYLREIIGVVSQEPVL
FATTIAENIRYGRENVTMEEIEKAVKEANAYDFIMKLPNKFDTLVGERGAQLSGGQKQRI
AIARALVRNPKILLLDEATSALDTESEAVVQVALDKAREGRTTIVIAHRLSTVRNADVIA
GFDDGVIVEKGSHDELMKEKGVYFKLVTMQTKGNEIELENTVGVSKGVVDALDMSPKDLE
SSLIRRGSTRKSIKGPQGQDRKLSTKEGLDENVPPVSFWRILKLNITEWPYFVVGIFCAI
INGGLQPAFSIIFSRIIGVFTKVTDPETKRQDSNIFSLLFLILGIISFITFFLQGFTFGK
AGEILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQN
IANLGTGIVISFIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGAGKIATE
AIENFRTVVSLTREEKFESMYDQSLQVPYSNSLRKAHIFGITFSITQAMMYFSYAACFRF
GAYLVQHGHMDFQDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSASHVIMIIEKTPQID
SYSTVGLKPNTVEGNLTFNEVMFNYPTRPDIPVLQGLSLEVKKGQTLALVGSSGCGKSTV
VQLLERFYDPLAGKVLIDGREIKKLNVQWLRAHMGIVSQEPILFDCSIAENIAYGDNSRV
VSQEEIVQAAKEANIHPFIETLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRRPRILLL
DEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVQEYGTHQQ
LLAQKGIYFSMVSVQAGAKRSSTVTM
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaagaaggccgaatcgaaagagcagggaagaagaacttcttgaaaagggat
aaaaaaagtaaaaatgataagaaagaaaagaagccagctgtcagtgtttttgccatgttt
cgctattcaaactggcttgatagattgtatatgttgctggggactacggctgccatcatc
catggagctggactgcccctcatgatgctggtttttggagaaatgacagatagcttcgca
agtataggaaatatgggaaatttaacttttccaaatatgatttatgcaaattgtgtgaat
tgcccagataacagcaccacactggaggagaaaatgacagtgtacgcctattattactgt
ggcatcggtgctggcgtgcttgttgctgcttacatccaggtttcgttctggtgcctggca
gctggaagacagatacacaaaatcagaaaacagttttttcatgctatcatgcggcaggag
ataggctggtttgatgtgcatgatgttggggagcttaacacccggctcacagatgacgtc
tccaaaattaatgaaggagttggtgacaaaattggaatgttctttcagtcaatagcaacg
ttcttcactggttttatagtaggatttacacgtggttggaagctgactctagtgattctg
gccatcagtcctgttcttggtctgtcagctgctatctgggcaaagatactgtcttcattt
actgataaagaactcttggcctatgcaaaagctggagcagtagctgaagaggtgttagcc
gccattagaactgtgattgcatttggaggacaaaagaaagaacttgaaaggtataacaaa
aatttggaagaagccaaaaggattggaataaagaaagctattacagccaacatttctatt
ggtgccgctttcctgttgatttatgcatcctatgccctggcattctggtatgggaccacc
ttggtcctctcaaatgaatatactattggacaagtactcactgttttcttttctgtgtta
attggggcttttagtgttggacaggcctctccaagcattgaagcatttgcaaacgcaaga
ggagcagcttacgaaatcttcaaaatcattgatagtaagccaagcattgacagctattca
aagaatggacacaaaccagataatatcaagggaaatctggaattcagaaacgttcacttc
agttacccatctcgaaatgaagttaagatcttgaaggggctcaacttgaaggtagagagc
gggcagacggtggccctggtcgggaacagcggctgtgggaaaagcacgacggtccagctg
atgcagaggctctatgaccccacggagggcgtggtcagtattgatggacaggatatcagg
acgatcaacgtaaggtatctgcgggaaattatcggcgtggtgagccaggagcccgtgctc
tttgccaccacgatagctgagaacattcgctatggccgggaaaatgtcaccatggaagag
attgagaaagctgtgaaggaagccaacgcctatgactttatcatgaaactgcctaacaaa
tttgacaccctggttggagagagaggggcccagctgagtggtggacagaagcagagaatc
gccatcgctcgggccctggttcgtaacccgaagatcctcctgctggatgaggccacgtca
gcgctggacacggagagtgaagcggtggttcaggtggccctggataaggccagagaaggc
cggaccaccattgtgatagcccatcgtttgtccacagttcgcaatgctgatgtcattgct
ggttttgatgatggagtcattgtggagaaaggcagtcatgatgaactcatgaaggagaaa
ggcgtttacttcaaacttgtcacaatgcagacaaaaggcaatgaaatagaattagaaaat
acagttggtgtatccaaaggtgtagtcgatgctttggacatgtctccaaaagatttagaa
tccagtctaataagaagaggatcaactcgcaagagtatcaagggaccacaaggccaagac
agaaagcttagtacaaaagaaggcttggatgaaaatgtacctccagtttccttttggagg
attctgaagctgaatataactgaatggccttattttgtggttggcatattttgtgccatt
ataaatggaggtctgcaaccagcattttcaataatattttcaaggattataggggttttt
accaaagtcacagatcctgaaaccaaacgacaggacagtaacatattttcactcttgttt
ctaatccttggaattatttcttttatcacatttttccttcagggcttcacgtttggcaaa
gccggagagatcctcaccaagcggctgcggtacatggttttcaggtccatgctgagacag
gacgtgagctggttcgatgaccctaaaaacaccacgggagcattgaccaccaggcttgcc
aatgatgctgctcaagttaaaggggctattggttccaggcttgctgtcattacccaaaat
atagcaaatcttgggacaggcattgttatatcattcatctatggctggcaactaacactt
ttactcttggcgattgtacccatcattgcaatagcaggagttgttgaaatgaaaatgtta
tctggacaagcactgaaagataagaaagagctagaaggtgccgggaagattgccactgaa
gcaatagaaaacttccgaactgttgtttctttgactcgggaggagaagtttgaatctatg
tatgaccagagtttgcaggtaccatacagtaactctttgaggaaggcacacatctttgga
atcactttttccatcacccaggcaatgatgtatttttcttacgctgcctgtttccggttt
ggtgcctacttggtacaacatggccacatggactttcaggatgttctcttagtcttctca
gctattgtctttggtgccatggcagtgggacaggttagttcatttgctcctgactacgcc
aaagccaaagtgtcggcatcccatgtcatcatgatcattgaaaagacccctcagattgac
agctacagcaccgtgggcttaaagccgaatacagtggaaggaaatctgacatttaatgaa
gtcatgttcaactaccccactcgaccagacatcccagtgcttcaggggctgagcctggag
gtgaagaagggccagaccctggccttggtgggcagcagcggctgtgggaagagcacggtg
gtccagctcctggagcggttctacgaccccttggctggaaaagtgctaattgacggcagg
gagattaaaaaactgaacgtccagtggctccgagcacacatgggcatcgtgtcccaggag
cccatcctgtttgactgcagcattgctgagaacatcgcctatggggacaacagccgggtc
gtgtcccaggaggagatcgtgcaggcggccaaggaggccaacatccaccccttcatcgag
acactgcctgataaatataacaccagagtgggagacaaaggaacgcagctctctggcggc
cagaaacagcgcattgcaatagctcgtgcccttgtcagacggcctcgtattttgcttctg
gatgaagctacatcggctctggatacagaaagtgaaaaggttgtccaagaagccctggac
aaagccagagaaggccgcacctgcatcgtgatcgctcaccgcctgtccaccatccagaac
gcagacttgatcgtggtgattcagaacggcaaagtccaggagtatggcacacaccagcaa
ctgctggcacagaaaggcatctatttctccatggtcagcgtccaggctggagcaaagcgc
tcatcaactgtgaccatgtga
DBGET
integrated database retrieval system
