Sus scrofa (pig): 396974
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Entry
396974 CDS
T01009
Symbol
VCL
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04510
Focal adhesion
ssc04520
Adherens junction
ssc04670
Leukocyte transendothelial migration
ssc04810
Regulation of actin cytoskeleton
ssc04820
Cytoskeleton in muscle cells
ssc05100
Bacterial invasion of epithelial cells
ssc05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
396974 (VCL)
04520 Adherens junction
396974 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
396974 (VCL)
04810 Regulation of actin cytoskeleton
396974 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
396974 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
396974 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
396974 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssc04812
]
396974 (VCL)
04147 Exosome [BR:
ssc04147
]
396974 (VCL)
Cytoskeleton proteins [BR:
ssc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
396974 (VCL)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
396974 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
396974
NCBI-ProteinID:
NP_999099
Ensembl:
ENSSSCG00000010313
UniProt:
P26234
LinkDB
All DBs
Position
14:76700143..76811875
Genome browser
AA seq
1067 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALASIDSKLNQAKGWLRDPTASPGDAGEQAI
RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQG
LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIA
ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR
AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ
DLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVE
GIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMM
MAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASD
EVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQA
TEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacgcgaacgatcgagagcatcctggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggcaaagccatccctgacctc
accgcgcctgtggccgccgtgcaggcggcggtcagcaacctcgtccgggttggaaaagag
actgttcaaaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gttgagaatgcttgtaccaagcttgtccaggcagcccagatgcttcagtcagacccttac
tcagtgcctgctcgagactatctgatcgatgggtcaaggggcatcctctccggcacatca
gacctgctcctcaccttcgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaagtggtggaaactatggaagatttggtcacttac
acaaagaatcttggaccaggaatgactaagatggccaagatgattgacgagaggcagcag
gaactgactcaccaggagcaccgagtgatgttggtgaattcaatgaacactgtaaaagag
ctgttgccagttctcatttccgctatgaagatttttgtaacaactaaaaactcaaaaaac
caaggaatagaagaagctttgaaaaatcgcaattttactgtagaaaagatgagtgcagaa
attaatgaaatcattcgtgtattacaactcacttcttgggacgaagatgcctgggccagc
aagaaggacactgaagccatgaagagagccttggcttccatagactccaaactgaaccag
gccaaaggttggcttcgtgaccccactgcctccccaggtgatgctggtgagcaggccatc
aggcagatcttagatgaagctggaaaagtcggtgaactctgtgcaggcaaagaacgcagg
gagatcctgggaacctgcaaaatgctagggcagatgactgatcaagtggctgacctccga
gccagaggacaaggagcctcaccggtggccatgcagaaagcccagcaggtgtctcagggt
ctggatgtgctcacagctaaagtggaaaatgcagcccgcaagctggaagccatgaccaac
tcaaagcagagcattgcgaagaagatcgatgctgctcagaattggctcgcagatccaaat
ggtggaccagaaggagaagaacagattcgaggggccttggctgaagctcggaaaatagca
gaattatgtgatgatcctaaagagagagatgacattctgcgttctcttggagaaatatct
gctctgacttctaaattagcagatctacgaagacagggaaaaggagattccccagaggcc
cgcgcattggccaaacaggtggccacggccctgcagaacttgcagaccaaaaccaacagg
gctgtggccaacagcagacctgccaaagcagctgtgcaccttgagggcaagattgagcaa
gcacagcggtggattgataatcccacagtggatgaccggggagttggtcaggctgccatc
cgggggcttgtagccgaagggcatcgtctggctaatgtcatgatggggccttatcgccaa
gatcttctggcaaagtgtgaccgagtggaccagctgacagcccagctggctgacctggct
gccagaggggaaggggagagtcctcaggcgagagcacttgcatctcaactccaagactcc
ttaaaggatctgaaagcccggatgcaagaagccatgactcaagaggtgtcagatgttttc
agtgataccacaactcccatcaagctgctggcagtggcagccactgcccctcctgatgca
cccaatagagaagaggtgtttgatgagagggcagctaactttgaaaaccattcaggaagg
cttggtgccacagcagagaaggcggctgcagttggaactgctaataaatcaacagtagaa
ggcattcaggcctcagtgaagacagcccgagaactcacaccccaggttgtctcagccgct
cgcatcttacttaggaatcctggaaatcaagctgcttatgaacattttgagaccatgaag
aaccagtggattgataatgttgaaaaaatgacagggttggtggacgaagccattgacacc
aaatctctgttggatgcttccgaagaagcgattaaaaaagacctggacaagtgtaaagta
gccatggccaacattcagcctcagatgctggttgctggggcaaccagcatcgctcgtcgg
gccaaccgcattctgctggtggctaagagggaggtggagaactctgaggatcccaagttc
cgtgaggcggtgaaagctgcctctgacgaattgagcaaaaccatctccccaatggtgatg
gatgcaaaggctgtggcaggaaacatttctgaccctggcctgcaaaagagcttcctagac
tcaggataccggatcctgggagccgtggccaaggtgagagaagccttccaacctcaggag
cctgacttcccgcctcctccgccagaccttgaacagctccgcctgacagatgagcttgct
cctcccaaaccacctctgcctgagggtgaggtccctccgcccaggcctccaccaccagag
gagaaggatgaagagttccctgagcagaaagccggagaggtgattaaccagccaatgatg
atggctgccaggcagctccatgatgaagctcgcaaatggtccagtaagggcaatgacatc
attgcagcagccaagcgcatggctctgctaatggccgagatgtctcggctggtcagaggg
ggcagtggtaccaagcgggcactgattcagtgtgccaaggacatcgccaaggcctcagac
gaggtgactcggttggccaaggaggttgccaagcagtgcacagataagcggattagaacc
aacctcttacaggtatgcgagcgaatcccaaccataagcacccagcttaaaatcctgtcc
acagtgaaggccaccatgctgggccggaccaacatcagtgatgaggagtctgagcaggcc
acagagatgctggttcacaatgcccagaatctgatgcaatctgtgaaggagactgttcga
gaagcagaagcagcttcaatcaaaattagaacggatgctggatttacactgcgctgggtt
agaaagactccctggtaccagtag
DBGET
integrated database retrieval system
