Sus scrofa (pig): 397018
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Entry
397018 CDS
T01009
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1
KO
K13885
scavenger receptor class B, member 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03272
Virion - Hepatitis viruses
ssc04145
Phagocytosis
ssc04913
Ovarian steroidogenesis
ssc04925
Aldosterone synthesis and secretion
ssc04927
Cortisol synthesis and secretion
ssc04934
Cushing syndrome
ssc04975
Fat digestion and absorption
ssc04976
Bile secretion
ssc04977
Vitamin digestion and absorption
ssc04979
Cholesterol metabolism
ssc05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
397018 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
397018 (SCARB1)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
397018 (SCARB1)
04925 Aldosterone synthesis and secretion
397018 (SCARB1)
04927 Cortisol synthesis and secretion
397018 (SCARB1)
09154 Digestive system
04976 Bile secretion
397018 (SCARB1)
04975 Fat digestion and absorption
397018 (SCARB1)
04979 Cholesterol metabolism
397018 (SCARB1)
04977 Vitamin digestion and absorption
397018 (SCARB1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
397018 (SCARB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
397018 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
397018 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
397018 (SCARB1)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Phagocytosis
Scavenger receptors
397018 (SCARB1)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
397018 (SCARB1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD36
SHR3_chaperone
Motif
Other DBs
NCBI-GeneID:
397018
NCBI-ProteinID:
NP_999132
Ensembl:
ENSSSCG00000009759
UniProt:
Q8SQC1
LinkDB
All DBs
Position
14:<28301421..28393568
Genome browser
AA seq
509 aa
AA seq
DB search
MGSRSRARQVAAALGFVGLLLAALGAVMIVMVPSIIKQQVLKNVRIDPSSLSFNMWKEIP
VPFYLSVYFFDVINPNEILQGQKPQVRERGPYVYREFRHKSNITFNDNDTVSFLEYRSYQ
FQPHKSRGLESDYIVIPNILVLSASVMMEDRPMSLKLIMTFAFSALGERAFVNRTVGEIM
WGYEDPLIHLINKYFPNMFPFKGKFGLFAELNNSDSGLFTVFTGVKDFSRIHLVDKWNGL
SKVNFWHSDQCNMINGTSGQMWAPFMTPESSLEFYSPEACRSMKLIYKEQGVFEGIPTFR
FVAPNTLFANGSVYPPNEGFCPCMESGIQNVSTCRFNAPLFLSHPHFYNADPVLAEAVSG
LHPNTEEHSLFLDIHPVTGIPMNCSVKLQLSLYIKSVKGIGQTGKIEPVVLPLLWFAESG
AMEGETLQTFYTQLVLMPKVLHYAQYVLLALGCVLLFIPIVYQIRSQEKCYLFWSSSKKG
SKDKEAIQAYSESLMTPAPKGTVLQEARL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccgctccagagcgcgccaggtggccgcggcgctgggcttcgttgggctgctc
ttagctgcactgggcgctgttatgatcgtgatggtgccctcgatcatcaagcagcaggtc
ctcaagaatgtgcgcatcgaccccagcagcctgtccttcaacatgtggaaggagatccct
gtccctttctacctctccgtctacttctttgatgtcatcaaccccaacgagatcctccag
ggccagaagccacaggtgcgggagcgcgggccctacgtgtacagggagttcaggcacaag
agcaacatcaccttcaacgacaacgacacagtgtccttcctcgagtaccgcagttaccag
ttccagcctcacaagtcccgcggcctggagagtgactacatcgtcatacccaacatcctg
gtcctgagcgcgtcagtgatgatggaggataggcccatgagcctgaagctgatcatgacc
tttgcattcagtgcccttggcgagcgcgccttcgtgaaccgcactgttggtgagattatg
tggggctacgaggaccccctcatacatctcatcaataagtacttccccaacatgttcccc
ttcaagggcaagttcgggttatttgctgagctcaacaactccgattccgggctcttcacc
gtgttcacaggggtcaaagacttcagcaggatccaccttgtagacaagtggaatgggctc
agcaaggtcaacttctggcattccgatcagtgcaacatgattaatggaacttccgggcag
atgtgggcaccatttatgactcccgaatcctctctggagttctacagccccgaggcctgc
cggtccatgaagctcatctacaaggagcagggggtgtttgaaggcatccccacctttcgt
ttcgtggctcccaacaccttattcgccaatggctctgtctacccacccaatgagggcttt
tgcccgtgcatggagtctggaattcagaatgttagcacctgcaggttcaatgcacccttg
tttctctcccatcctcacttctacaatgctgacccagttctggcagaggcagtgtctggc
ctccaccctaacacagaagagcattccttgttcctggacattcatccggtcaccgggatc
cctatgaactgctctgtgaagcttcagctgagtctctacattaagtctgtgaaaggcatt
ggacaaaccgggaagattgaaccggtggtcctgccgctgctgtggtttgcagagagcggg
gcaatggagggggagacccttcagacattctacactcagctggtgttgatgcccaaggtg
ctgcactatgcccagtacgtgctccttgctctgggctgcgtcctgctgttcatccccatc
gtctaccagatccggagccaagagaaatgctatttattttggagtagtagtaaaaagggc
tcaaaggataaggaggccattcaggcctattctgaatccctgatgacaccagctcccaag
ggaactgtactgcaagaagcaagactgtag
DBGET
integrated database retrieval system
