Sus scrofa (pig): 397198
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Entry
397198 CDS
T01009
Symbol
SFTPD
Name
(RefSeq) pulmonary surfactant-associated protein D precursor
KO
K10068
pulmonary surfactant-associated protein D
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
397198 (SFTPD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
397198 (SFTPD)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ssc04091
]
397198 (SFTPD)
Membrane trafficking [BR:
ssc04131
]
Endocytosis
Phagocytosis
Opsonins
397198 (SFTPD)
Lectins [BR:
ssc04091
]
C-Type lectins
Group 3: Collectins
397198 (SFTPD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Surfac_D-trimer
Lectin_C
DUF4982
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
397198
NCBI-ProteinID:
NP_999275
Ensembl:
ENSSSCG00000010334
Vega:
OTTSUSG00000002483
UniProt:
Q9N1X4
Structure
PDB
LinkDB
All DBs
Position
14:82051400..82069258
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AA seq
378 aa
AA seq
DB search
MLLLPLSVLILLTQPPRSLGAEMKTYSQRAVANACALVMCSPMENGLPGRDGRDGREGPR
GEKGDPGLPGAVGRAGMPGLAGPVGPKGDNGSTGEPGAKGDIGPCGPPGPPGIPGPAGKE
GPSGQQGNIGPPGTPGPKGETGPKGEVGALGMQGSTGARGPAGLKGERGAPGERGAPGSA
GAAGPAGATGPQGPSGARGPPGLKGDRGPPGERGAKGESGLPGITALRQQVETLQGQVQR
LQKAFSQYKKVELFPNGRGVGEKIFKTGGFEKTFQDAQQVCTQAGGQMASPRSETENEAL
SQLVTAQNKAAFLSMTDIKTEGNFTYPTGEPLVYANWAPGEPNNNGGSSGAENCVEIFPN
GKWNDKACGELRLVICEF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcctccctctctccgtgctgatcctgctcacacagcccccgaggtcactggga
gcagaaatgaagacctattcccagagagcagtggccaacgcctgcgccctggtcatgtgt
agccccatggagaatggcctgcctggtcgtgatggtcgggatgggagagagggccctcgg
ggcgagaagggggatccaggtttgccaggagctgtagggcgagcggggatgcctggactg
gctggcccagttgggcccaaaggggacaacggctctactggagaacccggagcaaaggga
gacattggaccatgcgggcctccaggacctccaggtatacctggtccagccggaaaagaa
ggtccctcagggcagcaggggaacataggacctccaggcacaccaggccccaaaggagag
actgggcccaaaggagaagtgggtgccctgggcatgcagggctctacaggggcaagaggc
cctgcaggtcttaaaggagagagaggtgcccccggtgagcgtggagcccctggaagtgct
ggggcagcagggcctgctggagccacgggccctcagggcccttcaggtgccaggggcccc
ccaggactgaaaggggacagaggtcctcctggagaaagaggagccaagggagagagtgga
ctcccaggcatcactgctctgaggcaacaggtggagaccttacaggggcaggtacaacgc
ctccagaaggccttctctcagtataagaaagtggagctcttccccaatggccgaggtgtc
ggggagaagatcttcaagacgggaggctttgaaaagacttttcaggatgctcagcaggta
tgcacacaggccgggggacagatggcctccccacgctctgagactgagaacgaggccttg
agccagctggtcacagctcagaataaggctgctttcctgagcatgactgacatcaagacg
gagggcaatttcacctaccccacgggggagcccctggtctatgccaactgggcccctggg
gagcccaacaacaatggtggcagcagcggagcagagaactgtgtggagatctttcccaat
ggcaagtggaatgacaaggcctgcggagaactgcgcctcgtgatctgcgagttctga
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