Sus scrofa (pig): 397269
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Entry
397269 CDS
T01009
Symbol
ALCAM
Name
(RefSeq) CD166 antigen isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
397269 (ALCAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
397269 (ALCAM)
04090 CD molecules [BR:
ssc04090
]
397269 (ALCAM)
Cell adhesion molecules [BR:
ssc04515
]
Immunoglobulin superfamily
ALCAM
397269 (ALCAM)
CD molecules [BR:
ssc04090
]
Proteins
397269 (ALCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
Ig_2
I-set
ig
V-set
C1-set
DUF6377
Podoplanin
Amnionless
FixQ
PepSY_TM
FeoB_associated
Motif
Other DBs
NCBI-GeneID:
397269
NCBI-ProteinID:
XP_003358875
Ensembl:
ENSSSCG00000011946
Vega:
OTTSUSG00000002227
UniProt:
A0A5K1UB62
A0A4X1SHK9
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All DBs
Position
13:complement(153794991..153998241)
Genome browser
AA seq
583 aa
AA seq
DB search
MASKAAPSCRLVFCLLISAAALRPGLGLYTVNSAYGDNIIMPCRLDVPQNLMFGKWKYEK
PDGSPVFIAFRSSTKKSVQYDDVPEYKNRLSLSENYTLSISNAKISDEKRFVCMLVTEDN
VFEAPTVVKVFKQPSKPEIVSKAPFLETEKLKKLGECISKDSYPDGNITWYRNGKVLQPL
EEAVVIIFKKQMDPVTQLYTMTSSLEYKTTKADIQMPFTCSVTYYGPSGQKTVYSEQAIF
DIYYPTEQVTIQVLPPKNAIKEGDNITLKCLGNGNPPPEEFLFYLPGQPEGIRSSNTYTL
TDVRRNATGDYKCSLIDKKSMIASTTITVHYLDLSLNPSGEVTKQIGDALPVSCTISASR
NATVVWMKDNVRLRSSPSFSSLHYQDAGNYVCETALQEVEGLKKRESLTLIVEGKPQIKM
TKKTDPSGLSKTIICHVEGFPKPAIQWTITGSGSVINQTEESPYINGRYYSKIIISPEEN
VTLTCTAENQLERTVNSLNVSAISIPEHDEADEISDENKEKVNDQAKLIVGIVVGLLLAA
LVAGVVYWLYMKKSKTASKHVNKDLGNLEENKKLEENNHKTEA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaaggcggccccctcctgccgtctggtcttctgcctcttgatctcagctgct
gctcttcggccaggtctcggattgtatactgtaaactcagcatatggagataacattatc
atgccttgccgactcgatgtacctcagaatctcatgtttggcaaatggaaatatgaaaag
cccgatggctccccagtatttattgccttcaggtcctccacaaagaaaagtgtgcagtat
gacgatgtaccagaatacaaaaacagattgagcctctcagaaaactacactttgtctatc
agtaatgcaaagatcagtgatgagaagagatttgtgtgcatgctggtcacagaggacaac
gtgtttgaggcacctacggtagtcaaggtgttcaagcaaccatctaaacctgaaattgta
agcaaagctccatttcttgaaacagagaagcttaaaaagttgggtgagtgcatttcaaaa
gacagttatccagatggcaacatcacgtggtacaggaatggaaaagtgctgcaacccctt
gaagaagcggtggtcataatttttaaaaagcaaatggacccagtaactcagctctatacc
atgacttcatccctggagtataagacaaccaaggctgacatacaaatgccattcacctgc
tctgtgacatattatggaccatctggccagaaaacagtgtactctgaacaagcaatcttt
gatatttactatcctacagagcaggtgacaatacaagtgctgccaccaaaaaatgccatc
aaagaaggagacaacatcactcttaaatgcctgggaaacgggaaccctcctcctgaagag
tttttgttttacttaccaggacagcccgaaggaataagaagttcaaatacttacacattg
acagatgtgagacgcaatgcaacaggagactacaaatgctccctgatagacaaaaaaagc
atgattgcttcaacaaccatcacggttcactatttggatttgtccttaaacccaagtggg
gaagtgaccaagcagattggcgatgctttgcctgtgtcatgcacaatatctgctagtagg
aacgcaactgtggtatggatgaaagataacgtcaggcttcgatcaagcccatcattttct
agtctccattatcaggatgctggaaactacgtctgtgaaactgctctgcaagaggttgaa
ggactaaagaaaagagagtcattgacgctcattgtagaaggaaaacctcaaatcaaaatg
acaaagaaaactgatcccagtggactatctaaaacaataatctgccatgtggaaggtttt
ccgaagccagctatacagtggacaattactggcagtggaagcgtcataaaccaaacagag
gaatctccttatatcaatggcaggtattatagtaaaattatcatttcccctgaagagaat
gttaccttaacttgcacagcagaaaaccagctggagagaacagtaaactccttgaatgtc
tctgctataagtattccagaacacgatgaggcagacgagataagtgatgaaaacaaggag
aaggtgaatgaccaggcaaaactaatcgtgggaatcgtggttggtctcctccttgctgct
ctggttgctggtgttgtctattggctgtatatgaagaaatcaaagactgcatcaaaacac
gtaaacaaggaccttggtaatctggaagaaaacaaaaagttagaagaaaacaatcacaaa
acagaagcctaa
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