Sus scrofa (pig): 397308
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Entry
397308 CDS
T01009
Symbol
SREBF1
Name
(RefSeq) sterol regulatory element-binding protein 1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04152
AMPK signaling pathway
ssc04910
Insulin signaling pathway
ssc04931
Insulin resistance
ssc04932
Non-alcoholic fatty liver disease
ssc04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
397308 (SREBF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
397308 (SREBF1)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
397308 (SREBF1)
04932 Non-alcoholic fatty liver disease
397308 (SREBF1)
04931 Insulin resistance
397308 (SREBF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
397308 (SREBF1)
04131 Membrane trafficking [BR:
ssc04131
]
397308 (SREBF1)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
397308 (SREBF1)
Membrane trafficking [BR:
ssc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
397308 (SREBF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
397308 (SREBF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
GIP4
ZapB
Motif
Other DBs
NCBI-GeneID:
397308
NCBI-ProteinID:
NP_999322
UniProt:
O97676
LinkDB
All DBs
Position
12:60733967..60750951
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AA seq
1151 aa
AA seq
DB search
MDEPPFTEAALEQALAEPCELDAALLTDIEDMLQLINNQDSDFPGLFDAPYAGVAGGTDP
TSPDASSPGSPTPPPSTMSSPLEGFLGGARTPPPPPVSPTQPAPTPLKMYPSVPAFSPGP
GIKEEPVPLTILQPPTPQPLSGALLPQSLPALAPPQLSPAPVLGYPSPPGSFSSATPPGS
TSQTLPGLPLASLPGVLPVSVHTQVQSAAPQQLLTATATPVVSPGTTTVTSQIQQVPVLL
QPHFIKADSLLLTTMKTDMGTPVKAAGIGSLAPGTAVQAAPLQTLVSGGTILATVPLVVD
TDKLPINRLAAGGKALSSGQSRGEKRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNK
SAVLRKAIDYIRFLQQSNQKLKQENLSLRTAAHKSKSLKDLVSCSSGGRTDVPMEGVKPE
VVDTLSPPPSDAGSPSQSSPLSLGSRGSSSGGSGSDSEPDSPVFEDSQMKPEQLPAPHGR
GMLDRSRLALCVLVFLCLSCNPLASLMGSWALPGPSDATSAYHGPWRSVLGAEGRDGPGW
VLWLLPPLVWLTNGLLVLLFLALLFVYGEPVTRPHSDPAVRFWRHRKQADLDLARGDFAQ
AAQQLWLALRALGRPLPTSHLDLACSLLWNLIRHLLQRLWVGRWLAGRAGGLRRDSALEA
DTRTSACDAALVYHKLHQLHTMGKYPGGHLDAANLALSALNLAECAGDALSVAVLAEVYV
AAALRVKTSLPRALHFLTRFFLSSARQACLAQSGSVPVAMQWLCHPVGHRFFVDGDWAVC
GAPRDSLYSVAGNPVDPLAQVTQLFREHLLEQALHCVAQPSPGPGSADGDREFSEALGFL
QLLNSCCDTAGAPACSFSIASSTAATAGTDPVAKWWASLTAVVTHWLGRDEEAAERLYPL
VEHLPRALQESERPLPRAALHSFKAARALLGRGKAESGSASLAMCEKASGYLQDSLAATP
AGSSIDKAMQLLLCDLLLVARTSLWQRQKPPPPSQASQGSSSGAQASALELRGFQRDLSG
LRRLAQSFRPAMRRVFLHEATARLMAGASPARTHQLLDRSLRRRAGPCGRGGAAAAAAAE
LEPRPTRREQAEALLLASCYLPPGFLSAPGQRVGMLAEAARTLEKLGDRRLLHDCQQMLM
RLGGGTTVTSS
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccgcccttcacagaggcagccttggagcaggcgctggccgagccatgcgag
ctggacgcggcgctgctgaccgacatcgaagacatgcttcagctcatcaacaaccaagac
agcgacttccccggcctgttcgacgcgccctacgctggcgttgcaggaggcacggacccc
accagtcctgatgccagctccccaggcagcccgacgccgcctccttccaccatgagctcc
ccgcttgaaggcttcctggggggggccaggacgccgccaccgccccccgtgtccccaacc
cagcctgcacccaccccgctgaagatgtacccgtcggtgcctgccttctcgcctgggccg
ggcatcaaggaggagccagtgccactgaccatcctgcagccccccaccccacagcccctg
tctggggctctcctgccccagagccttccagccctcgcccctccgcagttgagccctgcc
cccgtgttgggctaccccagccctcctggaagcttctcctcggcgacccctccagggagc
acctcacagacgctgcctggcctgccgctggcctctctgcccggggtcctgcccgtctcc
gtgcacacccaggttcaaagtgcggccccccagcagctgttgacagccacggccaccccc
gtggtgtcccctggaacaaccactgtgacctcgcagatccagcaggtcccggtcctgctg
cagccccacttcatcaaggcggactccctgctcctgacgaccatgaaaacagacatgggg
acccctgtgaaggcggcgggcatcggctccctggcccctggcacagccgtgcaggcagca
cctttgcagaccctggtgagcggcgggaccatcctggcgacggtgcctctggtagtggac
actgacaagctgcccatcaaccgcctggcagctgggggcaaagccctgagctcaggccag
agccgtggtgagaagcggacggctcacaatgccatcgagaaacgctaccgctcctccatc
aatgacaagatcatcgagctcaaggacctggtggtgggcacggaggcgaagctgaataaa
tccgccgtcttgcgcaaggccatcgactacatccgcttccttcagcagagcaaccagaag
ctcaagcaggagaacctgagtctgcggactgctgcccacaaaagcaagtctctgaaggac
ctggtgtcctgcagcagcggaggccgcaccgacgtgcccatggagggtgtgaagccggag
gtggtagacacccttagcccgcccccctccgacgccggctcgccctcccagagcagcccc
ttgtccctcggcagcaggggcagcagcagcggtggcagtggcagtgactcagagcccgac
agcccggtttttgaggacagccagatgaagccagagcagctgccggccccccacggccgg
ggcatgctggaccgctcccgcctggccctgtgcgtgctcgtcttcctctgtctctcctgc
aaccccttggcctcactgatgggcagctgggctctccctggcccctccgatgccaccagc
gcctaccacgggccctggcgcagcgtactgggcgctgagggcagagatggccctggctgg
gtcctgtggctgctgcccccgctggtctggctgacgaatgggctgctggtgctgctcttc
ttggcgcttctctttgtctatggagagccggtcacgcggccccactcggatccagctgtg
cgcttctggaggcatcgcaagcaggccgacctggacctggcccggggggacttcgcccag
gctgcccagcagctgtggctggccctgcgggcgctgggccggcccctgcccacctcccac
ctggacctggcctgcagcctgctctggaacctcatccgccacctgctgcagcgtctctgg
gtgggccgctggctggcgggccgggccgggggcctgcggagggacagcgccctggaggcg
gacacccgcaccagcgcctgtgacgcggccctcgtctaccacaagctgcaccagctgcac
accatggggaagtacccaggcgggcacctcgatgccgccaacctggcgctgagtgccctg
aacctggcggagtgtgcgggtgatgccctgtccgtggccgtgctggcggaggtctatgtg
gccgctgccctgcgagtcaagaccagtctcccccgggccttgcactttctgacccgcttc
ttcctgagtagcgcccgccaggcctgcctggcacaaagcggctcggtgcctgttgccatg
cagtggctctgccaccctgtgggccaccgtttcttcgtggatggggactgggccgtgtgc
ggtgccccccgggacagcttgtacagcgtggctgggaacccagtggaccccctggcccag
gtgactcagttgttccgtgaacacctcttggagcaagccctgcattgcgtggcccagccc
agccccggccctggatcagctgatggggacagggaattctcagaggccctcgggttcctg
cagctgctcaacagctgttgtgacacagccggggctcctgcctgcagcttctccattgcc
tccagcacagccgccacggccggcacagacccggtcgccaagtggtgggcctcgctgacg
gctgtggtgacccactggctggggcgggacgaggaggcggccgagcggctgtacccgctg
gtggagcacctgccccgcgccctgcaggagtccgagagacccctgcccagggcagctctg
cactccttcaaggccgcccgggccctgctgggccgcgggaaggcagagtctggctcagcc
agcctggccatgtgtgagaaggccagtgggtacctgcaggacagcctggccgccacgcca
gccggcagctccattgacaaggccatgcagctgctcctgtgtgacctgctccttgtggcg
cgcaccagcctgtggcagcggcagaagccgcccccaccctcccaggcctcgcagggctcg
agcagcggggcccaggcctctgcgctcgagctgcgcggcttccagagggacctgagtggc
ctgaggcgcctggcgcagagcttccggcctgccatgcggagggtgttcctccatgaggcc
accgccaggctgatggccggggccagccccgcgcggacgcaccagctcctggaccgcagt
ctgaggaggagggcgggcccctgcggcagaggaggcgcggcggccgcggcggcggcggag
ctggaaccgcggcccacgcggcgggagcaggccgaggccctgctgctcgcctcctgctac
ctgccgcccggcttcctgtcggcgccggggcagcgcgtgggcatgctggccgaggcggcg
cgcacgctcgagaagctcggcgaccgccggctgctgcacgactgccagcagatgctcatg
cgcctgggcggcgggaccaccgtgacctccagctag
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