Sus scrofa (pig): 397349
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Entry
397349 CDS
T01009
Symbol
CAPN3
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
397349 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
397349 (CAPN3)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
397349 (CAPN3)
Peptidases and inhibitors [BR:
ssc01002
]
Cysteine peptidases
Family C2: calpain family
397349 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
397349
NCBI-ProteinID:
NP_999336
Ensembl:
ENSSSCG00000004728
UniProt:
P43368
LinkDB
All DBs
Position
1:complement(128960117..129013508)
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AA seq
822 aa
AA seq
DB search
MPTVISASMAPRTGAEPRSPGPMPQAAQGKGTEAGVGNPGGKYSAIISRNFPIIGVKEKT
FEQLHKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNKRLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPRDMYKIMKKAIERGSLMGCSIDDGTNMTYGTSPSGLKMGDLIARMVRNMDESRLR
DSDLIPEGCSDDRPTRTIVPVQFETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNP
WGQVEWNGSWSDSWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFIYHFTKLEICNLTAD
ALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICS
FLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSRTYIN
MREVSERFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVRKKKT
KPIIFVSDRANSNKELGVDQESEEGQDKTSPDKQEKSPKPEPSNTDQESEEQQQFRNIFR
QIAGDDMEICADELKNVLNRVVNKHKDLKTEGFTLESCRSMIALMDTDGSGRLNLQEFHH
LWKKIKSWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNNQLYDIITMRYADKYMNIDF
DSFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcattagcgcgtctatggccccacggacaggggccgagcccaggtcccca
ggaccgatgccccaggcggcccagggcaagggcacggaggccggggttggaaacccaggt
ggtaaatactcagccatcatcagccgcaattttcccattattggcgtgaaagagaagaca
tttgagcagcttcacaagaaatgcctagaaaagaaggttctttatctggatcctgagttc
ccaccggacgagacctcgctcttttatagccagaagttccccatccagttcgtctggaag
agacctccggaaatttgtgagaatccccgatttatcattggtggagccaacagaactgac
atctgtcaaggagacctaggggactgctggtttctggcagccatcgcttgcctgaccctc
aacaagcgtctgcttttccgagtcataccccatgatcagagtttcaccgaaaactacgca
gggatctttcacttccagttctggcgctacggagactgggtggacgtggttattgatgac
tgcctgccaacttacaacaatcaactggttttcaccaaatccaaccaccgcaatgagttc
tggagtgctctgctggagaaggcttatgctaagctccatggttcatacgaagccctgaaa
ggtggaaacactacagaggccatggaggacttcacaggaggagtgacagagttttttgaa
atcaaagatgctcccagagacatgtacaagatcatgaagaaagccatcgagaggggctcc
ctcatgggctgctccattgatgatggcacaaacatgacctatggaacctctccttctggg
ctgaaaatgggggatttgattgcacggatggtgaggaacatggacgagtcgcggctcagg
gactcagacctcatccctgagggatgctcagatgacagaccgacccggacaattgttcct
gttcagttcgagacaagaatggcctgtgggctggtcaaaggccacgcctattcggttact
gggctggaggaggccctgttcaagggtgaaaaggtgaagcttgtgcggctgcggaacccc
tggggccaggtggagtggaatggctcctggagtgacagttggaaggactggagctttgtg
gacaaagatgagaaggcccgtctgcagcaccaggtcactgaggatggagagttctggatg
tcttatgatgatttcatctaccatttcacaaagctggagatctgcaacctcacagctgat
gccctggagtccgacaagcttcagacttggacagtgtctgtgaacgagggccgctgggtg
aggggctgctctgccggaggctgtcgcaacttcccagacactttctggaccaacccacag
taccgtctgaagctcctggaggaggatgatgaccctgacgactccgaggtgatctgcagc
ttcctggtagcactgatgcagaagaaccggcggaaggaccggaagctgggggccaacctc
ttcaccatcggcttcgccatctacgaggtccccaaagagatgcatggaaacaagcagcac
ttgcagaaggacttcttcctgtacaatgcctccaaggctaggagcagaacctacattaac
atgcgggaggtgtccgagcgcttccgcctgccccccagcgagtacgtcattgtgccctcc
acctatgagccccaccaggagggggaattcatcctccgggtcttctccgaaaagaggaac
ctctctgaggaagttgaaaataccatctctgtggatcgaccagtgagaaagaaaaaaacc
aagcccatcatcttcgtttcagacagagcaaacagcaacaaggagttgggtgtggaccag
gaatcagaggagggccaagacaaaacaagccctgataaacaagagaaatccccaaagcca
gagcccagcaacactgaccaggaaagtgaggaacagcagcaattccggaacattttcagg
cagatagcaggcgatgacatggagatctgtgcagatgagctcaagaatgtccttaacaga
gtggtgaacaaacataaggacctgaagactgaagggttcacattggagtcctgccgtagc
atgattgctctcatggatacagacggctctggaagactgaacctgcaagagttccaccac
ctctggaagaagattaaatcctggcagaaaattttcaagcattatgacaccgaccaatcc
ggcaccatcaacagctatgagatgcgaaatgcagtcaatgacgcaggcttccacctcaac
aaccagctctatgacatcatcaccatgcggtacgcagacaagtacatgaacatcgacttt
gacagttttatctgctgcttcgtcaggctggagggcatgttcagagcttttaatgccttt
gacaaggatggagatggtatcatcaaactcaatgttctagagtggctgcagctcaccatg
tatgcctga
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