Sus scrofa (pig): 397383
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Entry
397383 CDS
T01009
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
397383 (TRIM50)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
397383 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
U-box
Prok-RING_4
zf-RING_4
Sina_RING
zf-Nse
CcmH
Baculo_IE-1
DUF1198
zf-RING_6
DUF7575
SSNA1
zf_RING_Vps8_fungal
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
397383
NCBI-ProteinID:
NP_999351
Ensembl:
ENSSSCG00000007703
UniProt:
Q865W2
LinkDB
All DBs
Position
3:complement(10647690..10655345)
Genome browser
AA seq
486 aa
AA seq
DB search
MAWQVSVPELEDRLQCPVCLEVFKEPLMLQCGHSYCKGCLLSLSRHLDSELRCPVCRQEV
DSSSSPPNVSLARVIEALQLPGDPEPQVCTHHRNPLSLFCEKDQELICGLCGLLGSHQHH
RVTPVSTVYSRMKEELAALISDLKQEQKKVEEQVAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGVEGHTRGLVASLDMQLEQARGAQERLAQATCMLEQFGNESHYEF
IRYHSTASSAELQQARLLEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDPT
TAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLASRGFSCGRHYWEVVVGSKSDW
RLGVIKGTASRKGKLNKSPEHGVWLIGLKEGRVYEAFSCPRVPLPVAGHPHRIGVYLHYE
QGELTFFDADRPDDLRLLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPLPSGPGHLTP
SQPTKL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaggtgagtgtgcccgagctggaggaccgcctgcagtgccccgtctgcctg
gaggtcttcaaggagcccctgatgctgcagtgcggccactcttactgcaagggctgcctg
ctgtccctgtcccgccacctggactcggagctgcgctgccctgtgtgccggcaggaggtg
gactccagcagctccccgcccaacgtctccctggcacgtgtgatcgaagccctgcagctc
cccggggacccggagccccaggtctgcacccatcaccggaacccactcagcctcttctgc
gagaaggaccaggagcttatctgcggcctctgcggcctgctgggctcccaccagcaccac
cgggtcacccccgtctccactgtctatagccgcatgaaggaggagctagcagccctcatc
tccgacctgaagcaggagcagaagaaggtggaagaacaagtcgccaaactggtgaacaac
aggacccggattgtcaacgagtctgatgtcttcagctgggtgatccgccgcgagttccag
gagctgcaccacctggtggacgaggagaaggcccgctgcctagagggggtagagggtcac
acccgtggcctcgtggcctcgctggacatgcaactggagcaggcccggggcgctcaggag
cggctggcccaggccacgtgtatgctggagcagtttgggaacgagagtcactacgagttc
atccggtaccactccacggcctccagcgcagagctccagcaggcccggctcttggaaggt
gcattcagccccatctccttcaaaccaggcctgcaccaggccgacatcaagctgacggtg
tggaaaaggctcttccgaaaggttctgccagccccagagtccctcaagctggatcccacc
acggcccacccgctcctggagctctccaagggcaacacagtggtgcagtgcgggctcctg
gcccagcggcgcgccagccagcccgagcgcttcgactacagcacgtgcgtcctggccagc
aggggcttctcctgcggccgccactactgggaggtggtggtgggcagcaagagcgactgg
cgcctgggggtcatcaagggcacggccagtcgcaagggcaagctgaacaagtccccagag
cacggcgtgtggctcatcggcctgaaggagggtcgggtgtacgaggccttcagctgcccg
cgggtgcccctgcccgtggccggccacccccaccgcatcggcgtctacttgcactacgag
cagggggagctcaccttcttcgatgctgaccgccccgatgacctgcggctgctctacacg
ttccaggccgacttccagggcaagctctaccccatcctggacacatgctggcacgaacgg
ggtagcaactccctgcccatggtgctgcccctgcccagcgggccaggccacctcaccccc
tcgcagcccaccaagctctag
DBGET
integrated database retrieval system
