Sus scrofa (pig): 397387
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Entry
397387 CDS
T01009
Symbol
THRA
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04080
Neuroactive ligand-receptor interaction
ssc04081
Hormone signaling
ssc04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
397387 (THRA)
04081 Hormone signaling
397387 (THRA)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
397387 (THRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
397387 (THRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssc03310
]
397387 (THRA)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
397387 (THRA)
Nuclear receptors [BR:
ssc03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
397387 (THRA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRAME_N
Motif
Other DBs
NCBI-GeneID:
397387
NCBI-ProteinID:
NP_999355
UniProt:
O97716
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All DBs
Position
12:complement(22270506..22296684)
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AA seq
410 aa
AA seq
DB search
MEQKPSKVECGSDPEENSARSPDGKRKRKNGQCSLKTSMSGYIPSYLDKDEQCVVCGDKA
TGYHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDSCCVIDKITRNQCQLCRFKKCIAVGM
AMDLVLDDSKRVAKRKLIEQNRERRRKEEMIRSLQQRPEPTPEEWDLIHVATEAHRSTNA
QGSHWKQRRKFLPDDIGQSPIVSMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFS
ELPCEDQIILLKGCCMEIMSLRAAVRYDPESDTLTLSGEMAVKREQLKNGGLGVVSDAIF
ELGKSLSAFNLDDTEVALLQAVLLMSTDRSGLLCVDKIEKSQEAYLLAFEHYVNHRKHNI
PHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagccaagcaaggtggagtgtgggtcagacccagaggagaacagtgccagg
tcaccagatggaaagcgaaaaagaaagaacggccaatgttccctgaaaaccagcatgtca
gggtatatccctagttacctggacaaagacgagcagtgtgtcgtgtgtggggacaaggca
accggttatcactaccgctgcatcacttgtgagggctgcaagggcttctttcgccgcaca
atccagaagaatctccatcccacctactcatgcaagtatgacagctgctgtgtcattgac
aagatcacccgcaatcagtgccagctgtgccgcttcaagaagtgcatcgctgtgggcatg
gccatggacttggttctagatgattcgaagcgggtggccaagcgcaagctgatcgagcag
aaccgggagcggcgcaggaaggaggagatgatccgatcactgcagcagcgaccggagccc
actccggaagagtgggacctgatccacgttgccacggaggcccatcgcagcacaaacgcc
cagggcagccactggaagcagaggaggaaattcctgccggatgacattggccagtcaccc
atcgtctccatgccggacggagacaaggtggacctagaggccttcagtgagtttaccaag
atcatcaccccggccatcacccgcgtggtggactttgccaaaaaactgcccatgttctcc
gagctgccttgcgaagaccagatcatcctcctgaaggggtgctgcatggagatcatgtct
ctgcgggcggctgtccgctatgaccccgagagcgacacactgacgctgagcggggagatg
gccgtcaagcgggagcagctcaagaatggcggcctgggcgtcgtctccgacgccatcttt
gaactgggcaagtcactctctgcctttaacctggacgacacggaagtggctctgctgcag
gctgtgctgctaatgtcaacagaccgctcgggcctgctgtgcgtggacaagatcgagaag
agtcaggaggcgtacctgctggcgttcgagcactacgtcaaccaccgcaaacacaacatt
ccgcacttctggcccaagctgctgatgaaggtgactgacctccgcatgatcggggcctgc
cacgccagccgcttcctccacatgaaagtcgagtgccccaccgaactcttccccccactc
ttcctcgaggtctttgaggatcaggaagtctaa
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