Sus scrofa (pig): 397396
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Entry
397396 CDS
T01009
Symbol
BGN
Name
(RefSeq) biglycan isoform X2
KO
K08118
biglycan
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
397396 (BGN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssc00535
]
397396 (BGN)
Proteoglycans [BR:
ssc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
397396 (BGN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_14
LRR_5
Motif
Other DBs
NCBI-GeneID:
397396
NCBI-ProteinID:
XP_003135523
Ensembl:
ENSSSCG00000012766
Vega:
OTTSUSG00000004931
UniProt:
A0A8D1TM90
A0A5K1UKC5
LinkDB
All DBs
Position
X:124282048..124295450
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AA seq
369 aa
AA seq
DB search
MWPLWLLASLLALSQALPFEQKAFWDFTLDDGLPMLNDEEASGADSTSGIPDLDALPPTF
SAMCPFGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYAL
VLVNNKISKIHAKAFSPLRKLQKLYISKNHLVEIPPNLPSSLAELRIHDNRIRKVPKGVF
SGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHN
KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDL
KLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRL
AIQFGNYKK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtggcccctgtggctcctggcgtccctgctggccctgagccaggccctgccgtttgag
caaaaagccttctgggacttcaccctggacgacgggctgcccatgctgaatgacgaggag
gcttcgggtgccgactcgacctcgggcatcccggacctggacgccctcccgcccaccttc
agtgccatgtgccctttcggctgccactgccacctgcgggtcgtccagtgctctgacctg
ggtctgaaggccgtgcccaaggagatctcgcccgacaccaccctgctggacctgcagaat
aacgacatctccgagctccgaaaggacgacttcaaaggcctccagcacctctacgccctc
gtcctggtgaacaacaagatttccaagatccacgcgaaggccttcagccccctgaggaag
ctgcagaagctctacatctccaagaaccacctggtggagatcccccccaacctgcccagc
tccctggcggagctccgcatccatgacaaccgcatccgcaaggtgcccaagggcgtcttc
agcgggctgcgcaacatgaactgcatcgagatgggtgggaaccccctggagaacagcggc
tttgaacctggagccttcgatggcctgaagctcaactacctgcgcatctctgaggccaag
ctcactggcatccccaaagacctccccgagactctgaacgaactccatctggaccacaac
aagatccaggctatcgagctggaggatctgctccgctattccaagctgtacaggctgggc
ctaggccacaaccagatccgcatgatcgagaacgggagcctgagttttctgcccaccctg
cgggagctgcacttggacaacaacaagctgtccagggtgcctgctggcctccccgacctc
aagctcctccaggtggtctacctgcacaccaacaacatcaccaaggtgggcgtcaatgac
ttctgcccggtgggcttcggggtcaagcgggcctattacaacggcatcagcctcttcaac
aaccccgtgccctactgggaggtgcagccggccaccttccgctgcgtcacggaccgtctg
gccattcagtttggcaactacaaaaagtag
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integrated database retrieval system
