Sus scrofa (pig): 397436
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Entry
397436 CDS
T01009
Symbol
CASQ2
Name
(RefSeq) LOW QUALITY PROTEIN: calsequestrin-2
KO
K23445
calsequestrin 2
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04020
Calcium signaling pathway
ssc04260
Cardiac muscle contraction
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
397436 (CASQ2)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
397436 (CASQ2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Calsequestrin
Thioredoxin_6
DUF6567
Motif
Other DBs
NCBI-GeneID:
397436
NCBI-ProteinID:
XP_020945654
Ensembl:
ENSSSCG00000006745
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Position
4:104918204..104984019
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AA seq
409 aa
AA seq
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MKRTHLLVLGVYLLSSCGAEEGLNFPXYDGKDRVVSLTEKNFKQVLKKYDLLCLYYHEPV
TSDKVSQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFNEEGSLYILKGD
RTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDHIKLIGFFKSEDSEYYK
AFEEAAEHFQPYIKFFATFDKGVAKKLSLKMNEVDFYEPFMEEPIVIPDKPYTEEEIVEF
VKEHQRPTLRRLRPEDMFETWEDNLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPD
LSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSIWMDIPDDDDLPTAEELED
WVEDVLSGKINTEDDDDDEEEEDDDDDDDDEDDNNSDDEDNGDSDDDDE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacgcacctgcttgtgctgggggtctacctgctgtcctcctgcggggcggag
gaggggctgaacttcccancctatgacggcaaggaccgcgtggtcagtctgaccgagaag
aacttcaagcaggttttgaagaaatacgacttgctctgcctctactaccacgagccggtg
acttcggataaagtctcgcagaagcagttccagctgaaagaaattgtgctggagcttgtg
gcccaggtcctggaacataaagacataggctttgtgatggtggatgccaagaaagaagcc
aagcttgccaagaaactgggttttaatgaagaaggaagcctgtatatccttaagggcgat
cgtacaattgagtttgatggcgaatttgcagccgatgtcttggtggagtttctcctggat
ctcattgaagacccagtggagatcatcaatagcaaactggaagtccaagcttttgagcgc
atcgaggaccacatcaaactcataggctttttcaagagtgaggactcagaatattacaag
gcttttgaagaggcagctgaacacttccagccttacatcaaattttttgctacctttgac
aaaggggttgcaaagaaattgtccttgaagatgaacgaggttgacttctacgagccattt
atggaagagcccattgtcatccctgacaaaccttacacggaagaggagattgtggagttt
gtgaaggagcatcaaagacccactctacgtcgcctgcgcccagaagatatgtttgaaaca
tgggaagataatttgaacgggatccacattgtggcctttgcagagaggagtgacccagat
ggctacgagttcctggagatcctgaagcaggtcgccagggacaacacagacaacccggac
ctgagcatcgtgtggatcgaccccgatgacttccctctgcttgttgcctactgggaaaag
actttcaagattgaccttttcaagccacagattggggtggtgaacgtgacagatgctgac
agcatctggatggacatcccagatgacgatgacctgcccacagctgaagagctggaagac
tgggttgaggatgtgctctcggggaagatcaacactgaggacgatgacgatgacgaggaa
gaagaggacgatgacgacgacgacgacgacgaggatgacaataattctgatgatgaggat
aatggtgacagtgatgacgatgatgaatag
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