Sus scrofa (pig): 397482
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Entry
397482 CDS
T01009
Symbol
PAFAH1B1
Name
(RefSeq) platelet-activating factor acetylhydrolase IB subunit alpha
KO
K16794
platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00565
Ether lipid metabolism
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09103 Lipid metabolism
00565 Ether lipid metabolism
397482 (PAFAH1B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
397482 (PAFAH1B1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssc04147
]
397482 (PAFAH1B1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
397482 (PAFAH1B1)
Exosome [BR:
ssc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
397482 (PAFAH1B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_SCAP
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
LisH
LisH_PAC1
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_IFT140_1st
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
Nucleoporin_N
Beta-prop_NUP159_NUP214
Pox_A_type_inc
Beta-prop_WDR11_2nd
ARMC9_LisH
LisH_2
SutA-RBD
Motif
Other DBs
NCBI-GeneID:
397482
NCBI-ProteinID:
NP_999415
Ensembl:
ENSSSCG00000017836
UniProt:
Q9GL51
LinkDB
All DBs
Position
12:48567329..48735836
Genome browser
AA seq
410 aa
AA seq
DB search
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV
RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK
TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgtcccagagacaacgagatgaactaaatcgagctatagcagattatcttcgt
tcaaatggctatgaagaagcatattcagtttttaaaaaggaagctgaattagatatgaat
gaagaattagataagaaatatgctggtcttttggaaaaaaaatggacatctgttattaga
ttacaaaagaaggttatggaattagaatcaaaactaaatgaagcgaaagaagaatttacg
tcgggtggacctcttggtcaaaaacgagacccaaaagaatggattccccgtccaccagaa
aaatatgcattgagtggtcataggagtccagttactcgagtcattttccatcctgtgttc
agtgttatggtctctgcttcagaggatgctacaattaaggtgtgggattatgagactgga
gattttgaaagaactcttaaggggcatacagactctgtacaggatatatcatttgaccac
agtggcaagcttctggcttcatgttctgcagatatgaccattaaactatgggattttcag
ggctttgaatgcatcagaaccatgcatggccatgaccacaatgtttcttcagtagccatc
atgcccaatggagatcatatagtgtctgccgcaagggataaaactataaaaatgtgggaa
gtgcaaactggctactgtgtgaagacattcacaggacacagagagtgggtacgtatggtg
cggccaaatcaggatggcacgctgatagccagctgttccaatgaccagactgtgcgcgta
tgggtcgtagcaacaaaggaatgcaaggctgagcttcgagaacatgagcatgtggtagaa
tgcatttcctgggctccagaaagctcatattcttccatctctgaagcaacaggatctgag
actaaaaaaagcggcaagcctgggccattcttactgtctggatccagagataagactatt
aagatgtgggacgtcagtactggcatgtgccttatgacccttgtgggtcatgataactgg
gtacgtggagttctgttccattctggggggaagtttattttgagttgcgctgatgacaag
accctgcgtgtgtgggattacaagaacaagcgatgcatgaagaccctcaatgcgcatgaa
cactttgttacctccttggatttccataagacggcaccatatgtggttactggcagtgta
gatcaaacagtaaaggtgtgggagtgccgttga
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