Sus scrofa (pig): 397528
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Entry
397528 CDS
T01009
Symbol
SDC4
Name
(RefSeq) syndecan-4 precursor
KO
K16338
syndecan 4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04512
ECM-receptor interaction
ssc04514
Cell adhesion molecules
ssc04820
Cytoskeleton in muscle cells
ssc05205
Proteoglycans in cancer
ssc05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
397528 (SDC4)
04514 Cell adhesion molecules
397528 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
397528 (SDC4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
397528 (SDC4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
397528 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssc00535
]
397528 (SDC4)
Proteoglycans [BR:
ssc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
397528 (SDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Ac76
Motif
Other DBs
NCBI-GeneID:
397528
NCBI-ProteinID:
NP_999449
Ensembl:
ENSSSCG00000007401
UniProt:
Q8HZJ6
A0A480JRC1
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All DBs
Position
17:complement(47650387..47670499)
Genome browser
AA seq
202 aa
AA seq
DB search
MASPRLLALLLLLVGAFNAAAAESIRETEVINPQDLLEGRYFSGDLPDDEDVGGPGQEPD
DFEWSGSGDLEGPEDKHMLPEVTHPLVPLDNHIPERTGPGGRVPTEPKELEENEVIPKRM
SPFDGDEDVSNKVSMSSTAQGSNIFERTEVLSALIVGGIVGILFAVFLVLLLVYRMKKKD
EGSYDLGKKPIYKKAPTNEFYA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccctcgcctgctcgcgctgctgctgctcctcgtgggggcctttaacgccgcc
gccgccgagtcgatccgagagaccgaggtcatcaacccccaggacctcctagaaggccga
tacttctccggagacctaccggatgacgaggatgttggggggccggggcaggaacctgat
gactttgagtggtctggctctggagatctggagggtccagaggacaagcatatgctcccg
gaagtgacacaccccttggtgcctctagacaaccacatccctgagaggaccggacccggg
ggccgggtccccaccgaacccaaggaactggaggagaatgaggtcattcccaagaggatg
tccccctttgatggggacgaggatgtgtccaacaaggtgtccatgtccagcaccgcccag
ggcagcaacatcttcgagaggacagaggttctgtcagctctgattgtgggcggcatcgtg
ggcatcctctttgctgttttcctggtcctgctgctggtgtatcggatgaagaagaaggac
gagggcagctacgacctgggcaagaaacccatctacaaaaaagcccccaccaatgagttc
tacgcctga
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integrated database retrieval system
