Sus scrofa (pig): 397663
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Entry
397663 CDS
T01009
Symbol
APP
Name
(RefSeq) amyloid beta A4 protein precursor
KO
K04520
amyloid beta A4 protein
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04726
Serotonergic synapse
ssc05010
Alzheimer disease
ssc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
397663 (APP)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
397663 (APP)
05022 Pathways of neurodegeneration - multiple diseases
397663 (APP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
397663 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssc00535
]
397663 (APP)
00536 Glycosaminoglycan binding proteins [BR:
ssc00536
]
397663 (APP)
Peptidases and inhibitors [BR:
ssc01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
397663 (APP)
Proteoglycans [BR:
ssc00535
]
Cell surface proteoglycans
Others
397663 (APP)
Glycosaminoglycan binding proteins [BR:
ssc00536
]
Heparan sulfate / Heparin
Others
397663 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
397663
NCBI-ProteinID:
NP_999537
Ensembl:
ENSSSCG00000012022
UniProt:
P79307
A0A480E073
LinkDB
All DBs
Position
13:complement(189434854..189716120)
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AA seq
770 aa
AA seq
DB search
MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRSRKQCKTHTHIVIPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
GVEFVCCPLAEESDNIDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVADVEEE
EAEDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC
RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEHLPQD
PVKLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQA
KNLPKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITAL
QAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYER
MNQSLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTET
KTTVELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTN
IKTEEISEVKMDAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITL
VMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggtttggcactggtcctgctggccgcctggacggctagggcgctggaggtg
cccactgatggcaatgccggcctgcttgcagaaccccaggttgccatgttctgtggcaaa
ctcaacatgcacatgaatgtgcagaatgggaagtgggagtcagatccgtcggggaccaaa
acctgcattggcaccaaggaaggcatcttgcagtactgccaagaagtctaccctgaactg
cagatcaccaatgtggtagaagccaaccaaccagtgaccatccagaactggtgcaagagg
agccggaagcagtgcaagacccacactcacattgtgattccgtaccgctgcttagttggc
gagtttgtaagcgatgccctccttgttccggacaagtgcaagttcttacaccaggagagg
atggatgtttgcgaaacccaccttcactggcacactgtggccaaagagacctgtagtgag
aagagtacgaacttgcatgactatggcatgttgctgccctgtggaattgacaagttccga
ggggtggagtttgtgtgttgcccactggccgaggaaagtgacaatatcgactcagcagat
gcagaagaggatgactcggacgtctggtggggtggagcagatacagactatgcagatggc
agtgaagacaaagtcgtggaggtcgcagaggaggaggaagtggctgatgtcgaggaagaa
gaagctgaggatgatgaggatgatgaggatggtgatgaggtagaagaagaggctgaggaa
ccctatgaagaggccacggagagaaccaccagcatcgccacaaccaccaccaccaccacg
gagtctgtggaagaggtggtccgagaggtgtgctctgaacaagccgagacggggccgtgc
cgagcaatgatctcccgctggtactttgatgtgactgaagggaagtgcgccccgttcttt
tacggcggatgtggcggcaaccgaaacaactttgacacagaggaatactgcatggccgtg
tgtggcagcgtcatgtcccaaagtttactcaagactacccaggaacatcttccccaagat
cctgttaaacttcctacaacagcagccagcaccccagatgccgttgacaagtatcttgag
acacctggagatgagaacgaacatgcgcatttccagaaagccaaagagaggctggaggcc
aagcaccgcgagagaatgtcccaggtcatgagagagtgggaagaggcagaacgtcaagca
aagaacttgcctaaagctgataagaaagcagtgatccagcatttccaggagaaagtggag
tctctggagcaggaagcagccaacgagaggcagcagttggtggagacgcacatggccaga
gtggaggccatgcttaacgaccgccggcgcctggccctggagaattacatcacggctctt
caggctgttcctcctcggcctcgtcatgtgttcaacatgctcaagaagtatgtccgtgcc
gaacagaaagacagacagcacaccctaaagcattttgaacacgttcgcatggtagatcca
aagaaagctgctcagatccgatcccaggttatgacacacctccgtgtgatttacgagcgc
atgaaccagtctctctccctgctctacaacgttcctgctgtggctgaggaaattcaggat
gaagttgatgagctgctgcagaaagagcaaaactactcggatgatgtcttggccaacatg
atcagcgaaccgaggatcagttatggaaacgatgctctcatgccgtctctgactgaaacc
aaaaccaccgtggagcttcttcctgtgaatggagagttcagcctggatgatctccagccc
tggcatccttttggggtagactctgtgcctgccaacacagaaaatgaagtcgagcctgtt
gacgcccgccctgcagccgaccgaggactgaccactcgaccaggttccgggttgaccaac
atcaagacggaagagatctctgaagtgaagatggatgcggagttccgacacgattcaggc
tatgaggttcatcaccaaaaactggtgttcttcgcagaagatgtgggttcaaacaaaggt
gccatcattggactcatggtgggtggtgttgtcatagcaaccgtgattgtcatcacctta
gtgatgctgaagaagaaacagtacacatccatccatcacggtgtggtggaggttgacgca
gctgtgaccccggaggagcgccacctctccaagatgcagcagaatggctatgaaaaccca
acttacaagttctttgagcagatgcagaactag
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integrated database retrieval system
