KEGG   Sus scrofa (pig): 407739
Entry
407739            CDS       T01009                                 
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04390  Hippo signaling pathway
ssc04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    407739 (SOX2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    407739 (SOX2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ssc03000]
    407739 (SOX2)
Transcription factors [BR:ssc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    407739 (SOX2)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 407739
NCBI-ProteinID: NP_001116669
Ensembl: ENSSSCG00000011771
UniProt: B1Q0D1
LinkDB
Position
13:119668476..119669435
AA seq 319 aa
MYNMMETELKPPGPQQTSGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISRRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNCSYSMMQDQL
GYPQHPGLNAHSAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMTLG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHY
QSGPVPGTAINGTLPLSHM
NT seq 960 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagacggagctgaagccgcccggcccgcagcaaacttcagggggc
ggcggcggcggtggcaactctactgctgcggcggcgggcggcaaccagaagaacagccca
gaccgagttaagcggcccatgaacgctttcatggtgtggtcccgagggcagcggcgcaag
atggcccaagagaaccccaagatgcacaactcggagatcagcagacggctgggcgccgag
tggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcggctgcga
gcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaagacg
ctcatgaagaaggataagtacacactgcccggagggctgctggccccgggaggcaacagc
atggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgcatggac
agctacgcgcacatgaatggctggagcaactgcagctacagcatgatgcaggaccagctg
ggctatccgcagcacccgggcctcaatgcgcacagcgcggctcagatgcagcccatgcac
cgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatgacgctcggt
tccatgggctcagtggtcaagtccgaggcgagctccagcccccccgtggttacctcttct
tcccactccagggcgccctgccaggccggggacctacgggacatgatcagcatgtacctc
cccggcgctgaggtgccagagcccgccgcccccagcagacttcacatgtcccagcactac
cagagcggcccggtgcccggcacggccatcaacggtacactgcctctctctcacatgtga

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