Sus scrofa (pig): 407739
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Entry
407739 CDS
T01009
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04390
Hippo signaling pathway
ssc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
407739 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
407739 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
407739 (SOX2)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
407739 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
407739
NCBI-ProteinID:
NP_001116669
Ensembl:
ENSSSCG00000011771
UniProt:
B1Q0D1
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All DBs
Position
13:119668476..119669435
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AA seq
319 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISRRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNCSYSMMQDQL
GYPQHPGLNAHSAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMTLG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHY
QSGPVPGTAINGTLPLSHM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgcccggcccgcagcaaacttcagggggc
ggcggcggcggtggcaactctactgctgcggcggcgggcggcaaccagaagaacagccca
gaccgagttaagcggcccatgaacgctttcatggtgtggtcccgagggcagcggcgcaag
atggcccaagagaaccccaagatgcacaactcggagatcagcagacggctgggcgccgag
tggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcggctgcga
gcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaagacg
ctcatgaagaaggataagtacacactgcccggagggctgctggccccgggaggcaacagc
atggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgcatggac
agctacgcgcacatgaatggctggagcaactgcagctacagcatgatgcaggaccagctg
ggctatccgcagcacccgggcctcaatgcgcacagcgcggctcagatgcagcccatgcac
cgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatgacgctcggt
tccatgggctcagtggtcaagtccgaggcgagctccagcccccccgtggttacctcttct
tcccactccagggcgccctgccaggccggggacctacgggacatgatcagcatgtacctc
cccggcgctgaggtgccagagcccgccgcccccagcagacttcacatgtcccagcactac
cagagcggcccggtgcccggcacggccatcaacggtacactgcctctctctcacatgtga
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