Sus scrofa (pig): 414736
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Entry
414736 CDS
T01009
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X7
KO
K16498
protocadherin delta 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
414736 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssc01009
]
414736 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssc04515
]
414736 (PCDH11X)
Protein phosphatases and associated proteins [BR:
ssc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
414736 (PCDH11X)
Cell adhesion molecules [BR:
ssc04515
]
Cadherins
Protocadherins
414736 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6377
ROH1-like
Adeno_E3_CR2
LYRIC
DUF2613
Motif
Other DBs
NCBI-GeneID:
414736
NCBI-ProteinID:
XP_005673835
Ensembl:
ENSSSCG00000029771
UniProt:
A0A4X1W5L0
A0A287BLB8
LinkDB
All DBs
Position
X:74462811..75191930
Genome browser
AA seq
1026 aa
AA seq
DB search
MDLLSGTYIFAVLLACIVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDRSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIVVDAHCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYHLIK
GQSIFGLDVIETPEGEKMPQLIVQKELDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVA
DTNDNRPVFKENEIEVSIPENAPVGSSVTQLHATDADIGENAKIHFYFSNLISNMAKKLF
HLNSTTGLITIKEPLDREESPNHKLLVLASDGGLTPARAMVLVNVTDINDNIPSIDIRYI
INPINGTVVLSENAPLNTKIALITVTDKDADHNGRVSCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNS
PGTQLTKISAMDADSGRNAEINYLLGFDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTV
LAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVILSILDANDDFTIDPQTGVIQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVT
INVVDVNDNKPVFVVPSSNYSFELVPPSTNPGTVVFTVVAIDNDTGMNAELRYSMVGGNT
KGLFIIDQTSGNITLKEKCVFADLGLHRLVVKAKDLGQPDSLFNVVNVNLFVNESVTNAT
LIYELVRKNIETPVTQNIETTDASSPSSDYVKIVVAIVAGTITVILVIFITAVVRCQQSP
HLKAAQKNKQNSEWVTPNPENRQMIMMKKKKKKKKKHAPKNLLLNFVTIEEAKADDADNN
RSSITLDLPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPTFQIQPETPLNSK
HHIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRPTDSRTPTI
EIYSEI
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggtcctgttagcatgcatcgtatttcaa
tctggcgcccaggagaagaactacactatccgggaagaaatgccagaaaacgtcctaata
ggcgacttgctgaaagacctcaacttgtcgctaattccagacaggtccctaacaactcct
atgcagttcaagctagtgtataagactggggatgtgccactgattcgaattgaagagggt
actggtgagatcttcactactggagctcgcattgatcgtgagaaattatgtgctggtatc
gtggtggatgctcattgcttttatgaggtggaggtcgccgttctgcctgatgaaatattt
agactggttaagatacgttttctgatagaagatataaatgataatgcacctttattccca
gcaacagttatcaacatatcaattccagagaactcggctataaattctcggtatgctctc
ccagcggccattgatcctgacacaggaataaacggagttcaaaactatcatctaattaag
ggtcaaagtatttttgggcttgatgtcattgaaacaccagaaggagagaagatgccacag
ctgatagttcaaaaggagttagacagggaagagaaagatacatatgtaatgaaaataaag
gttgaagatggtggctttcctcaaagatccagtactgctattttgcaagtaagtgttgct
gatacaaatgataaccgcccagtcttcaaggagaatgaaattgaagtcagtataccagaa
aatgctcctgtaggttcttcagtgacacagctccatgccacagatgccgacataggtgaa
aacgccaagattcacttctatttcagcaatctaatctccaacatggccaagaagctgttc
cacctcaactccactactggacttataacaattaaagaaccactggatagggaggaatca
ccaaatcacaaattacttgttttagcaagtgatggtggattgacgccagcaagagcaatg
gtgctagtcaatgttacagatatcaatgataatatcccatcaattgacataagatacatc
atcaatcccatcaatggcactgtggttctttcagaaaacgctccactcaacaccaaaatt
gctctcataactgtgacagataaggatgctgaccataatggtagggtgtcatgctttaca
gaccatgaggtccctttcagattaaggccagtattcagtaatcagttccttctagagact
gctgcatatcttgattatgagtccacaagagaatatgccattaaattactggctgcagat
gctggcaaacctcctttgaatcagtcatccatgctcctcatcaaagtaaaagatgaaaat
gacaatgctccagttttcactcagcctttcctaagtctttctgttcctgagaataactct
cctggcacccaattgacaaaaataagtgcaatggatgcagacagtgggcgtaatgctgag
ataaattacctgctaggctttgatgctccatctgaattcaacttggatcatcgtacaggc
attctgaccgcagtgaagaaactggatagagaaaaacaggaaaaatattcattcacagtt
ctagcaaaagataatgggatgccacctttaatgaccaatgccacggtccttgtgactgtt
cttgatcagaatgacaacagtccagttttcacgcacaatgagtacaacttctatgttcca
gaaaaccttccaagacatggcacagtaggactaatcacagtaactgatcctgattatgga
gaaaattctgcagtcattctctccattttagatgcaaatgatgacttcaccattgatcca
caaactggtgtcatccaaccaaatatctcatttgatagagaaaaacaggaatcttatact
ttctatgtaaaagctgaggatggtggtaggatatcacgttcttcaactgccaaagtcacc
ataaatgtggttgatgttaatgacaacaaaccagtttttgttgtcccgtcttccaactac
tcttttgaactggttccaccatccactaatccaggtacagtggtcttcacagtagttgct
attgacaatgacactggcatgaatgcagagcttcgttatagcatggtaggaggaaacaca
aaaggtctatttataattgaccaaacttcaggcaacattacactgaaggagaaatgtgtc
tttgcagaccttggtttacacagattggtagtcaaagctaaggacttaggacaacctgat
tctctcttcaatgttgtaaatgtcaatctatttgtgaatgagtcagtgaccaatgctaca
ctgatttatgaattggtgcgcaaaaacattgaaacaccagtgacccaaaatattgagaca
actgatgcatcctcaccatccagtgactatgtcaagatagtggttgccattgtggctggc
accataactgtcatccttgttattttcatcactgctgtagtaagatgccagcaatcacca
caccttaaggctgctcagaaaaacaagcagaattctgaatgggttactccaaacccagaa
aacaggcagatgataatgatgaagaaaaagaagaagaagaagaagaagcatgcacctaag
aacttgctgcttaactttgtcactatcgaagaagctaaggcggatgatgctgacaacaat
agaagcagcatcacactagaccttcccattgagctggaagagcaaaccatgggcaagtac
aactggggcactacacctactactttcaagcctgacagccccgatttggcccggcactac
aaatctgcctctccacagcctaccttccagatccagccagaaactcccctgaattcgaag
caccacatcatccaggaactgcctcttgataacaccttcgtgggctgtgattccatctcc
aagtgttcctccagcagttctgatccctacagtgtttctgagtgcagctatccagtgaca
actttcaagacccctgtgtctgtgcacaccagaccgactgattccaggacaccaactatt
gaaatctacagtgagatataa
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